Top 10 genes with highest correlation to Rv2285/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1276c/- | (cc=0.571) | info on Rv1276c/- |
| Rv1279/- | (cc=0.5662) | info on Rv1279/- |
| Rv2559c/- | (cc=0.5642) | info on Rv2559c/- |
| Rv2917/- | (cc=0.5631) | info on Rv2917/- |
| Rv3038c/- | (cc=0.563) | info on Rv3038c/- |
| Rv2701c/suhB | (cc=0.5548) | info on Rv2701c/suhB |
| Rv0263c/- | (cc=0.551) | info on Rv0263c/- |
| Rv2515c/- | (cc=0.5473) | info on Rv2515c/- |
| Rv1104/- | (cc=0.5438) | info on Rv1104/- |
| Rv0894/- | (cc=0.5321) | info on Rv0894/- |
Correlation of Rv2285/- with Rv3038c/-
Normalized LFCs for Rv2285/-:
(description and provenance of datasets)
| Rv2285/- | Rv3038c/- | |
| Fe_supp_jason_reseq | -0.933 | -0.923 |
| low_pH_jason_reseq | 0.684 | 0.694 |
| NO_jason_reseq | 0.089 | 1.712 |
| B6_jason_reseq | 1.203 | 1.289 |
| MHCII_jason_reseq | -0.13 | 1.357 |
| Isoniazid02 | 0.528 | 0.383 |
| Rifampicin4 | 0.043 | 0.374 |
| Ethambutol3 | 0.331 | 0.168 |
| Meropenem3 | 1.58 | 0.315 |
| Vancomycin16 | 0.085 | 0.698 |
| Rv2680_day32 | -0.21 | 0.0 |
| H37Rv_KO_MarP | -0.341 | 0.214 |
| hypoxia_3wks | -0.12 | 1.388 |
| hypoxia_6wks | -0.234 | 1.034 |
| glycerol | 0.152 | 1.69 |
| cholesterol | 0.508 | 0.703 |
| AJ | 0.303 | 1.126 |
| Bibs02 | 0.419 | 1.142 |
| Bibs02c | -0.408 | -0.564 |
| BL6 | -0.632 | -1.031 |
| BL6a | -0.426 | -0.416 |
| BXD01 | -0.915 | 0.593 |
| BXD010 | -0.453 | -1.056 |
| BXD011 | -0.45 | -0.602 |
| BXD03 | -0.5 | -1.115 |
| BXD04 | -0.681 | -0.333 |
| BXD05 | 0.278 | -0.065 |
| BXD06 | -0.208 | -0.535 |
| BXD07 | -0.65 | 0.0 |
| BXD08 | -0.696 | 0.899 |
| BXD09 | -0.157 | -1.018 |
| CAST | 0.334 | 0.0 |
| CCcont | -1.587 | -1.082 |
| DS01 | -0.192 | 1.283 |
| DS02 | 0.306 | 2.28 |
| DS04 | -1.162 | 0.822 |
| DS0c | 0.325 | 1.354 |
| GP01 | -0.129 | 0.387 |
| GP02 | 0.579 | 2.435 |
| GP0c | -0.17 | 0.173 |
| NOD | 0.4 | -0.605 |
| NZO | 0.715 | 0.348 |
| PWK | 0.331 | 0.419 |
| H37Rv_KO_CtpC | -0.805 | -0.249 |
| H37Rv_KO_CtpD | -0.344 | -0.061 |
| H37Rv_KO_Rv1272 | -0.521 | -0.775 |
| H37Rv_KO_SugABC | -0.234 | -0.718 |
| H37Rv_KO_MbtN | -0.782 | 0.137 |
| Trans05 | -0.579 | -1.077 |
| macrophage_unactivated | -0.129 | -0.338 |
| IL1 | 0.03 | -1.032 |
| Rapamycin | -0.427 | -1.488 |
| Tcell | -0.342 | -0.349 |
| GMCSF | -1.336 | -1.281 |
| IFNab | -0.626 | -1.466 |
| IFNg | -0.949 | -1.296 |
| IFNg_GMCSF1 | 0.094 | -1.093 |
| Rv1432_day32 | 0.739 | 0.799 |
| Rv1565c_day32 | -0.248 | 0.0 |
| secA2_input | 0.027 | -0.438 |
| delta_Rv3594 | 0.274 | 1.037 |
| delta_Rv3717 | 0.676 | 1.735 |
| delta_Rv3811 | 0.877 | 1.966 |
| delta_Rv0954 | 0.707 | 0.99 |
| PonA1 | 0.375 | 1.458 |
| EccD1_KO | 1.437 | 0.257 |
| EspI_KO | 0.779 | 0.0 |
| PE35_KO | 0.723 | 1.383 |
| PPE68_KO | 0.835 | 0.928 |
| glycerol2 | -0.513 | -0.263 |
| lignocerate | -0.653 | -0.983 |
| oleate | 0.069 | 0.61 |
| phosphatidylcholine | -0.202 | 0.0 |
| acetate | -0.861 | -1.814 |
| glucAc | -0.887 | -2.228 |
| Rv0950ko | -0.431 | 0.748 |
| Rv1096ko | 0.751 | 0.513 |
| Rv3684ko | 0.508 | -0.305 |
| delta_otsA_trehalose | 0.456 | 0.991 |