Top 10 genes with highest correlation to Rv2285/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1276c/- | (cc=0.571) | info on Rv1276c/- |
| Rv1279/- | (cc=0.5662) | info on Rv1279/- |
| Rv2559c/- | (cc=0.5642) | info on Rv2559c/- |
| Rv2917/- | (cc=0.5631) | info on Rv2917/- |
| Rv3038c/- | (cc=0.563) | info on Rv3038c/- |
| Rv2701c/suhB | (cc=0.5548) | info on Rv2701c/suhB |
| Rv0263c/- | (cc=0.551) | info on Rv0263c/- |
| Rv2515c/- | (cc=0.5473) | info on Rv2515c/- |
| Rv1104/- | (cc=0.5438) | info on Rv1104/- |
| Rv0894/- | (cc=0.5321) | info on Rv0894/- |
Correlation of Rv2285/- with Rv1279/-
Normalized LFCs for Rv2285/-:
(description and provenance of datasets)
| Rv2285/- | Rv1279/- | |
| Fe_supp_jason_reseq | -0.933 | 0.508 |
| low_pH_jason_reseq | 0.684 | 0.13 |
| NO_jason_reseq | 0.089 | 0.399 |
| B6_jason_reseq | 1.203 | 0.578 |
| MHCII_jason_reseq | -0.13 | 0.125 |
| Isoniazid02 | 0.528 | 0.451 |
| Rifampicin4 | 0.043 | 0.065 |
| Ethambutol3 | 0.331 | 0.85 |
| Meropenem3 | 1.58 | 2.217 |
| Vancomycin16 | 0.085 | 0.098 |
| Rv2680_day32 | -0.21 | 0.171 |
| H37Rv_KO_MarP | -0.341 | -0.223 |
| hypoxia_3wks | -0.12 | 0.443 |
| hypoxia_6wks | -0.234 | 0.37 |
| glycerol | 0.152 | -0.884 |
| cholesterol | 0.508 | -0.325 |
| AJ | 0.303 | -0.212 |
| Bibs02 | 0.419 | 0.506 |
| Bibs02c | -0.408 | -0.541 |
| BL6 | -0.632 | -0.008 |
| BL6a | -0.426 | -0.349 |
| BXD01 | -0.915 | -0.326 |
| BXD010 | -0.453 | -0.035 |
| BXD011 | -0.45 | -0.224 |
| BXD03 | -0.5 | -0.114 |
| BXD04 | -0.681 | -0.42 |
| BXD05 | 0.278 | 0.293 |
| BXD06 | -0.208 | 0.0 |
| BXD07 | -0.65 | 0.295 |
| BXD08 | -0.696 | -0.299 |
| BXD09 | -0.157 | -0.118 |
| CAST | 0.334 | 0.092 |
| CCcont | -1.587 | -0.919 |
| DS01 | -0.192 | -0.115 |
| DS02 | 0.306 | -0.199 |
| DS04 | -1.162 | -0.42 |
| DS0c | 0.325 | -0.949 |
| GP01 | -0.129 | 0.389 |
| GP02 | 0.579 | 0.542 |
| GP0c | -0.17 | 0.233 |
| NOD | 0.4 | -0.763 |
| NZO | 0.715 | 0.532 |
| PWK | 0.331 | 0.141 |
| H37Rv_KO_CtpC | -0.805 | 0.095 |
| H37Rv_KO_CtpD | -0.344 | -1.052 |
| H37Rv_KO_Rv1272 | -0.521 | -0.341 |
| H37Rv_KO_SugABC | -0.234 | 0.199 |
| H37Rv_KO_MbtN | -0.782 | -0.888 |
| Trans05 | -0.579 | 0.313 |
| macrophage_unactivated | -0.129 | -0.057 |
| IL1 | 0.03 | -0.219 |
| Rapamycin | -0.427 | 0.055 |
| Tcell | -0.342 | -0.463 |
| GMCSF | -1.336 | 0.14 |
| IFNab | -0.626 | -0.054 |
| IFNg | -0.949 | 0.476 |
| IFNg_GMCSF1 | 0.094 | 0.085 |
| Rv1432_day32 | 0.739 | -0.076 |
| Rv1565c_day32 | -0.248 | 0.711 |
| secA2_input | 0.027 | 0.0 |
| delta_Rv3594 | 0.274 | 0.229 |
| delta_Rv3717 | 0.676 | 1.022 |
| delta_Rv3811 | 0.877 | 0.955 |
| delta_Rv0954 | 0.707 | 0.425 |
| PonA1 | 0.375 | 0.314 |
| EccD1_KO | 1.437 | 0.773 |
| EspI_KO | 0.779 | 0.813 |
| PE35_KO | 0.723 | 0.761 |
| PPE68_KO | 0.835 | 0.953 |
| glycerol2 | -0.513 | -0.406 |
| lignocerate | -0.653 | -0.712 |
| oleate | 0.069 | 0.045 |
| phosphatidylcholine | -0.202 | -0.602 |
| acetate | -0.861 | -0.372 |
| glucAc | -0.887 | -1.103 |
| Rv0950ko | -0.431 | -0.473 |
| Rv1096ko | 0.751 | 0.332 |
| Rv3684ko | 0.508 | 0.498 |
| delta_otsA_trehalose | 0.456 | -0.57 |