Top 10 genes with highest correlation to Rv2285/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1276c/- | (cc=0.571) | info on Rv1276c/- |
| Rv1279/- | (cc=0.5662) | info on Rv1279/- |
| Rv2559c/- | (cc=0.5642) | info on Rv2559c/- |
| Rv2917/- | (cc=0.5631) | info on Rv2917/- |
| Rv3038c/- | (cc=0.563) | info on Rv3038c/- |
| Rv2701c/suhB | (cc=0.5548) | info on Rv2701c/suhB |
| Rv0263c/- | (cc=0.551) | info on Rv0263c/- |
| Rv2515c/- | (cc=0.5473) | info on Rv2515c/- |
| Rv1104/- | (cc=0.5438) | info on Rv1104/- |
| Rv0894/- | (cc=0.5321) | info on Rv0894/- |
Correlation of Rv2285/- with Rv2559c/-
Normalized LFCs for Rv2285/-:
(description and provenance of datasets)
| Rv2285/- | Rv2559c/- | |
| Fe_supp_jason_reseq | -0.933 | -0.519 |
| low_pH_jason_reseq | 0.684 | -0.89 |
| NO_jason_reseq | 0.089 | 0.604 |
| B6_jason_reseq | 1.203 | 0.393 |
| MHCII_jason_reseq | -0.13 | 0.667 |
| Isoniazid02 | 0.528 | 0.716 |
| Rifampicin4 | 0.043 | 0.523 |
| Ethambutol3 | 0.331 | 1.459 |
| Meropenem3 | 1.58 | 2.195 |
| Vancomycin16 | 0.085 | 0.164 |
| Rv2680_day32 | -0.21 | 0.089 |
| H37Rv_KO_MarP | -0.341 | 0.08 |
| hypoxia_3wks | -0.12 | 0.152 |
| hypoxia_6wks | -0.234 | -0.821 |
| glycerol | 0.152 | 0.87 |
| cholesterol | 0.508 | 0.377 |
| AJ | 0.303 | 0.422 |
| Bibs02 | 0.419 | 0.111 |
| Bibs02c | -0.408 | 0.526 |
| BL6 | -0.632 | -1.122 |
| BL6a | -0.426 | 0.066 |
| BXD01 | -0.915 | -0.79 |
| BXD010 | -0.453 | -1.132 |
| BXD011 | -0.45 | -1.012 |
| BXD03 | -0.5 | -0.714 |
| BXD04 | -0.681 | -0.855 |
| BXD05 | 0.278 | -1.037 |
| BXD06 | -0.208 | -1.094 |
| BXD07 | -0.65 | -1.28 |
| BXD08 | -0.696 | -0.538 |
| BXD09 | -0.157 | -1.17 |
| CAST | 0.334 | 0.419 |
| CCcont | -1.587 | -0.875 |
| DS01 | -0.192 | 0.746 |
| DS02 | 0.306 | 0.777 |
| DS04 | -1.162 | -0.689 |
| DS0c | 0.325 | 0.096 |
| GP01 | -0.129 | 0.117 |
| GP02 | 0.579 | 0.413 |
| GP0c | -0.17 | -0.06 |
| NOD | 0.4 | 0.682 |
| NZO | 0.715 | 0.688 |
| PWK | 0.331 | 0.119 |
| H37Rv_KO_CtpC | -0.805 | -0.477 |
| H37Rv_KO_CtpD | -0.344 | 0.699 |
| H37Rv_KO_Rv1272 | -0.521 | -0.301 |
| H37Rv_KO_SugABC | -0.234 | 0.185 |
| H37Rv_KO_MbtN | -0.782 | -1.121 |
| Trans05 | -0.579 | -0.496 |
| macrophage_unactivated | -0.129 | -1.61 |
| IL1 | 0.03 | -0.946 |
| Rapamycin | -0.427 | -1.614 |
| Tcell | -0.342 | -0.57 |
| GMCSF | -1.336 | -1.304 |
| IFNab | -0.626 | -1.091 |
| IFNg | -0.949 | -1.16 |
| IFNg_GMCSF1 | 0.094 | -1.178 |
| Rv1432_day32 | 0.739 | -1.0 |
| Rv1565c_day32 | -0.248 | 0.486 |
| secA2_input | 0.027 | -0.085 |
| delta_Rv3594 | 0.274 | -0.545 |
| delta_Rv3717 | 0.676 | -0.575 |
| delta_Rv3811 | 0.877 | -0.494 |
| delta_Rv0954 | 0.707 | -0.367 |
| PonA1 | 0.375 | 0.355 |
| EccD1_KO | 1.437 | 0.904 |
| EspI_KO | 0.779 | 0.194 |
| PE35_KO | 0.723 | 0.744 |
| PPE68_KO | 0.835 | 1.03 |
| glycerol2 | -0.513 | -0.184 |
| lignocerate | -0.653 | -0.47 |
| oleate | 0.069 | -0.072 |
| phosphatidylcholine | -0.202 | -0.345 |
| acetate | -0.861 | -0.409 |
| glucAc | -0.887 | -0.285 |
| Rv0950ko | -0.431 | 0.543 |
| Rv1096ko | 0.751 | 0.573 |
| Rv3684ko | 0.508 | 0.717 |
| delta_otsA_trehalose | 0.456 | 1.64 |