Top 10 genes with highest correlation to Rv2250c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1640c/lysX | (cc=0.5895) | info on Rv1640c/lysX |
| Rv0645c/mmaA1 | (cc=0.5726) | info on Rv0645c/mmaA1 |
| Rv3821/- | (cc=0.5654) | info on Rv3821/- |
| Rv0644c/mmaA2 | (cc=0.5286) | info on Rv0644c/mmaA2 |
| Rv1925/fadD31 | (cc=0.5177) | info on Rv1925/fadD31 |
| Rv1058/fadD14 | (cc=0.5111) | info on Rv1058/fadD14 |
| Rv0425c/ctpH | (cc=0.508) | info on Rv0425c/ctpH |
| Rv1339/- | (cc=0.4944) | info on Rv1339/- |
| Rv0642c/mmaA4 | (cc=0.4923) | info on Rv0642c/mmaA4 |
| Rv0037c/- | (cc=0.49) | info on Rv0037c/- |
Correlation of Rv2250c/- with Rv0642c/mmaA4
Normalized LFCs for Rv2250c/-:
(description and provenance of datasets)
| Rv2250c/- | Rv0642c/mmaA4 | |
| Fe_supp_jason_reseq | 0.655 | 1.547 |
| low_pH_jason_reseq | -0.087 | 2.202 |
| NO_jason_reseq | 1.769 | 2.678 |
| B6_jason_reseq | 0.783 | -2.886 |
| MHCII_jason_reseq | 1.475 | -1.687 |
| Isoniazid02 | -1.74 | -1.333 |
| Rifampicin4 | -1.985 | -1.565 |
| Ethambutol3 | -1.75 | -2.112 |
| Meropenem3 | -1.468 | -1.815 |
| Vancomycin16 | -1.852 | -6.0 |
| Rv2680_day32 | 2.501 | -0.359 |
| H37Rv_KO_MarP | -0.104 | 0.571 |
| hypoxia_3wks | 0.67 | -0.937 |
| hypoxia_6wks | 1.33 | 3.548 |
| glycerol | 0.44 | 1.556 |
| cholesterol | 0.259 | -0.145 |
| AJ | -0.64 | 0.585 |
| Bibs02 | -0.195 | 0.717 |
| Bibs02c | -0.915 | 2.877 |
| BL6 | -0.161 | 2.544 |
| BL6a | -0.564 | 3.946 |
| BXD01 | -0.026 | 4.224 |
| BXD010 | 0.522 | 4.186 |
| BXD011 | 0.391 | 6.0 |
| BXD03 | -0.174 | 4.026 |
| BXD04 | 1.613 | 3.598 |
| BXD05 | 1.182 | 4.7 |
| BXD06 | 0.738 | 5.627 |
| BXD07 | 0.82 | 4.784 |
| BXD08 | -0.367 | 5.896 |
| BXD09 | 1.013 | 4.223 |
| CAST | -1.653 | -0.23 |
| CCcont | -0.275 | 5.608 |
| DS01 | 0.094 | -0.236 |
| DS02 | 0.101 | -0.217 |
| DS04 | -0.535 | 2.617 |
| DS0c | 0.555 | -0.217 |
| GP01 | 0.232 | 6.0 |
| GP02 | 0.172 | 3.274 |
| GP0c | 0.476 | 6.0 |
| NOD | 1.388 | 0.0 |
| NZO | -0.182 | -0.199 |
| PWK | 0.46 | 0.342 |
| H37Rv_KO_CtpC | -0.113 | 4.153 |
| H37Rv_KO_CtpD | 0.153 | 1.805 |
| H37Rv_KO_Rv1272 | 0.913 | 4.035 |
| H37Rv_KO_SugABC | 0.47 | 1.362 |
| H37Rv_KO_MbtN | 2.002 | 6.0 |
| Trans05 | -0.572 | 4.713 |
| macrophage_unactivated | -1.149 | -3.595 |
| IL1 | 1.246 | 0.297 |
| Rapamycin | 0.69 | -0.706 |
| Tcell | -1.571 | -0.124 |
| GMCSF | -3.44 | -3.126 |
| IFNab | -0.807 | -0.883 |
| IFNg | -2.779 | -4.153 |
| IFNg_GMCSF1 | -2.677 | -5.477 |
| Rv1432_day32 | 3.883 | -0.98 |
| Rv1565c_day32 | -2.071 | -1.21 |
| secA2_input | -0.714 | 0.424 |
| delta_Rv3594 | 0.558 | 1.768 |
| delta_Rv3717 | 2.201 | 3.284 |
| delta_Rv3811 | 0.785 | 1.646 |
| delta_Rv0954 | -0.588 | -2.158 |
| PonA1 | -0.866 | -6.0 |
| EccD1_KO | -1.483 | -6.0 |
| EspI_KO | -1.834 | -6.0 |
| PE35_KO | -1.604 | -6.0 |
| PPE68_KO | -2.329 | -6.0 |
| glycerol2 | -0.136 | -1.684 |
| lignocerate | -0.811 | -1.464 |
| oleate | 0.044 | -1.167 |
| phosphatidylcholine | -0.671 | -1.683 |
| acetate | 0.199 | -1.561 |
| glucAc | 0.678 | -0.451 |
| Rv0950ko | -0.054 | -3.98 |
| Rv1096ko | 0.992 | -3.906 |
| Rv3684ko | -0.118 | -1.628 |
| delta_otsA_trehalose | -0.043 | -0.595 |