Top 10 genes with highest correlation to Rv2250c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1640c/lysX | (cc=0.5895) | info on Rv1640c/lysX |
| Rv0645c/mmaA1 | (cc=0.5726) | info on Rv0645c/mmaA1 |
| Rv3821/- | (cc=0.5654) | info on Rv3821/- |
| Rv0644c/mmaA2 | (cc=0.5286) | info on Rv0644c/mmaA2 |
| Rv1925/fadD31 | (cc=0.5177) | info on Rv1925/fadD31 |
| Rv1058/fadD14 | (cc=0.5111) | info on Rv1058/fadD14 |
| Rv0425c/ctpH | (cc=0.508) | info on Rv0425c/ctpH |
| Rv1339/- | (cc=0.4944) | info on Rv1339/- |
| Rv0642c/mmaA4 | (cc=0.4923) | info on Rv0642c/mmaA4 |
| Rv0037c/- | (cc=0.49) | info on Rv0037c/- |
Correlation of Rv2250c/- with Rv0425c/ctpH
Normalized LFCs for Rv2250c/-:
(description and provenance of datasets)
| Rv2250c/- | Rv0425c/ctpH | |
| Fe_supp_jason_reseq | 0.655 | -1.718 |
| low_pH_jason_reseq | -0.087 | 1.173 |
| NO_jason_reseq | 1.769 | 0.118 |
| B6_jason_reseq | 0.783 | -0.236 |
| MHCII_jason_reseq | 1.475 | -0.013 |
| Isoniazid02 | -1.74 | -0.111 |
| Rifampicin4 | -1.985 | 0.701 |
| Ethambutol3 | -1.75 | -0.581 |
| Meropenem3 | -1.468 | -0.163 |
| Vancomycin16 | -1.852 | -0.255 |
| Rv2680_day32 | 2.501 | 2.133 |
| H37Rv_KO_MarP | -0.104 | 0.419 |
| hypoxia_3wks | 0.67 | 1.037 |
| hypoxia_6wks | 1.33 | 1.599 |
| glycerol | 0.44 | 0.743 |
| cholesterol | 0.259 | 0.278 |
| AJ | -0.64 | 0.151 |
| Bibs02 | -0.195 | 0.734 |
| Bibs02c | -0.915 | 0.264 |
| BL6 | -0.161 | 0.794 |
| BL6a | -0.564 | 1.347 |
| BXD01 | -0.026 | 1.183 |
| BXD010 | 0.522 | 1.184 |
| BXD011 | 0.391 | 1.811 |
| BXD03 | -0.174 | 0.677 |
| BXD04 | 1.613 | 1.388 |
| BXD05 | 1.182 | 1.185 |
| BXD06 | 0.738 | 1.52 |
| BXD07 | 0.82 | 0.914 |
| BXD08 | -0.367 | 1.311 |
| BXD09 | 1.013 | 1.391 |
| CAST | -1.653 | -0.357 |
| CCcont | -0.275 | 0.251 |
| DS01 | 0.094 | 0.491 |
| DS02 | 0.101 | 0.726 |
| DS04 | -0.535 | 0.675 |
| DS0c | 0.555 | 0.486 |
| GP01 | 0.232 | 1.245 |
| GP02 | 0.172 | 1.46 |
| GP0c | 0.476 | 0.667 |
| NOD | 1.388 | -0.226 |
| NZO | -0.182 | 0.552 |
| PWK | 0.46 | -0.097 |
| H37Rv_KO_CtpC | -0.113 | 0.178 |
| H37Rv_KO_CtpD | 0.153 | -1.43 |
| H37Rv_KO_Rv1272 | 0.913 | 1.055 |
| H37Rv_KO_SugABC | 0.47 | 0.736 |
| H37Rv_KO_MbtN | 2.002 | 1.73 |
| Trans05 | -0.572 | 2.05 |
| macrophage_unactivated | -1.149 | -0.41 |
| IL1 | 1.246 | 0.997 |
| Rapamycin | 0.69 | 0.755 |
| Tcell | -1.571 | 2.108 |
| GMCSF | -3.44 | 0.119 |
| IFNab | -0.807 | -0.502 |
| IFNg | -2.779 | 0.254 |
| IFNg_GMCSF1 | -2.677 | 0.041 |
| Rv1432_day32 | 3.883 | 3.046 |
| Rv1565c_day32 | -2.071 | -0.291 |
| secA2_input | -0.714 | 0.326 |
| delta_Rv3594 | 0.558 | -0.081 |
| delta_Rv3717 | 2.201 | 2.065 |
| delta_Rv3811 | 0.785 | 0.813 |
| delta_Rv0954 | -0.588 | -1.301 |
| PonA1 | -0.866 | -0.862 |
| EccD1_KO | -1.483 | -1.812 |
| EspI_KO | -1.834 | -2.139 |
| PE35_KO | -1.604 | -1.779 |
| PPE68_KO | -2.329 | -1.718 |
| glycerol2 | -0.136 | 0.27 |
| lignocerate | -0.811 | 0.726 |
| oleate | 0.044 | -0.403 |
| phosphatidylcholine | -0.671 | 0.249 |
| acetate | 0.199 | 0.733 |
| glucAc | 0.678 | 0.628 |
| Rv0950ko | -0.054 | -0.826 |
| Rv1096ko | 0.992 | -0.591 |
| Rv3684ko | -0.118 | -0.085 |
| delta_otsA_trehalose | -0.043 | -0.203 |