Top 10 genes with highest correlation to Rv2250c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1640c/lysX | (cc=0.5895) | info on Rv1640c/lysX |
| Rv0645c/mmaA1 | (cc=0.5726) | info on Rv0645c/mmaA1 |
| Rv3821/- | (cc=0.5654) | info on Rv3821/- |
| Rv0644c/mmaA2 | (cc=0.5286) | info on Rv0644c/mmaA2 |
| Rv1925/fadD31 | (cc=0.5177) | info on Rv1925/fadD31 |
| Rv1058/fadD14 | (cc=0.5111) | info on Rv1058/fadD14 |
| Rv0425c/ctpH | (cc=0.508) | info on Rv0425c/ctpH |
| Rv1339/- | (cc=0.4944) | info on Rv1339/- |
| Rv0642c/mmaA4 | (cc=0.4923) | info on Rv0642c/mmaA4 |
| Rv0037c/- | (cc=0.49) | info on Rv0037c/- |
Correlation of Rv2250c/- with Rv1640c/lysX
Normalized LFCs for Rv2250c/-:
(description and provenance of datasets)
| Rv2250c/- | Rv1640c/lysX | |
| Fe_supp_jason_reseq | 0.655 | 0.77 |
| low_pH_jason_reseq | -0.087 | -1.434 |
| NO_jason_reseq | 1.769 | -0.058 |
| B6_jason_reseq | 0.783 | 1.258 |
| MHCII_jason_reseq | 1.475 | 0.159 |
| Isoniazid02 | -1.74 | -1.263 |
| Rifampicin4 | -1.985 | -3.187 |
| Ethambutol3 | -1.75 | -2.24 |
| Meropenem3 | -1.468 | 0.879 |
| Vancomycin16 | -1.852 | -2.303 |
| Rv2680_day32 | 2.501 | 1.078 |
| H37Rv_KO_MarP | -0.104 | -2.764 |
| hypoxia_3wks | 0.67 | 4.366 |
| hypoxia_6wks | 1.33 | 3.111 |
| glycerol | 0.44 | -0.42 |
| cholesterol | 0.259 | -0.564 |
| AJ | -0.64 | -1.642 |
| Bibs02 | -0.195 | -0.498 |
| Bibs02c | -0.915 | 0.899 |
| BL6 | -0.161 | 0.906 |
| BL6a | -0.564 | 1.69 |
| BXD01 | -0.026 | 2.01 |
| BXD010 | 0.522 | 1.596 |
| BXD011 | 0.391 | 1.594 |
| BXD03 | -0.174 | 0.98 |
| BXD04 | 1.613 | 1.294 |
| BXD05 | 1.182 | 1.265 |
| BXD06 | 0.738 | 1.635 |
| BXD07 | 0.82 | 1.674 |
| BXD08 | -0.367 | 2.286 |
| BXD09 | 1.013 | 2.565 |
| CAST | -1.653 | -2.147 |
| CCcont | -0.275 | 1.12 |
| DS01 | 0.094 | 0.195 |
| DS02 | 0.101 | 0.247 |
| DS04 | -0.535 | 0.854 |
| DS0c | 0.555 | -0.115 |
| GP01 | 0.232 | 1.087 |
| GP02 | 0.172 | 1.427 |
| GP0c | 0.476 | 1.205 |
| NOD | 1.388 | -1.515 |
| NZO | -0.182 | -0.932 |
| PWK | 0.46 | -1.829 |
| H37Rv_KO_CtpC | -0.113 | 1.204 |
| H37Rv_KO_CtpD | 0.153 | 0.694 |
| H37Rv_KO_Rv1272 | 0.913 | 1.286 |
| H37Rv_KO_SugABC | 0.47 | 1.294 |
| H37Rv_KO_MbtN | 2.002 | 2.599 |
| Trans05 | -0.572 | 1.806 |
| macrophage_unactivated | -1.149 | -2.358 |
| IL1 | 1.246 | -1.465 |
| Rapamycin | 0.69 | -1.645 |
| Tcell | -1.571 | -1.147 |
| GMCSF | -3.44 | -1.719 |
| IFNab | -0.807 | -0.293 |
| IFNg | -2.779 | -0.919 |
| IFNg_GMCSF1 | -2.677 | -2.077 |
| Rv1432_day32 | 3.883 | 2.379 |
| Rv1565c_day32 | -2.071 | -2.854 |
| secA2_input | -0.714 | 0.864 |
| delta_Rv3594 | 0.558 | 1.628 |
| delta_Rv3717 | 2.201 | 3.157 |
| delta_Rv3811 | 0.785 | 1.46 |
| delta_Rv0954 | -0.588 | -0.261 |
| PonA1 | -0.866 | -0.856 |
| EccD1_KO | -1.483 | -1.332 |
| EspI_KO | -1.834 | -1.557 |
| PE35_KO | -1.604 | -2.15 |
| PPE68_KO | -2.329 | -1.296 |
| glycerol2 | -0.136 | -0.744 |
| lignocerate | -0.811 | -1.006 |
| oleate | 0.044 | -2.925 |
| phosphatidylcholine | -0.671 | -1.678 |
| acetate | 0.199 | 0.271 |
| glucAc | 0.678 | 0.236 |
| Rv0950ko | -0.054 | -1.128 |
| Rv1096ko | 0.992 | 0.093 |
| Rv3684ko | -0.118 | 1.055 |
| delta_otsA_trehalose | -0.043 | -0.468 |