Top 10 genes with highest correlation to Rv2246/kasB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2198c/mmpS3 | (cc=0.7108) | info on Rv2198c/mmpS3 |
| Rv2256c/- | (cc=0.6853) | info on Rv2256c/- |
| Rv0541c/- | (cc=0.6757) | info on Rv0541c/- |
| Rv1512/epiA | (cc=0.6749) | info on Rv1512/epiA |
| Rv1080c/greA | (cc=0.674) | info on Rv1080c/greA |
| Rv3044/fecB | (cc=0.6578) | info on Rv3044/fecB |
| Rv2837c/- | (cc=0.6329) | info on Rv2837c/- |
| Rv2400c/subI | (cc=0.6236) | info on Rv2400c/subI |
| Rv2131c/cysQ | (cc=0.607) | info on Rv2131c/cysQ |
| Rv3764c/tcrY | (cc=0.6042) | info on Rv3764c/tcrY |
Correlation of Rv2246/kasB with Rv2131c/cysQ
Normalized LFCs for Rv2246/kasB:
(description and provenance of datasets)
| Rv2246/kasB | Rv2131c/cysQ | |
| Fe_supp_jason_reseq | 0.766 | -1.579 |
| low_pH_jason_reseq | 0.0 | 2.441 |
| NO_jason_reseq | 0.0 | -2.042 |
| B6_jason_reseq | 0.0 | -1.402 |
| MHCII_jason_reseq | 0.0 | -0.977 |
| Isoniazid02 | -0.119 | 4.744 |
| Rifampicin4 | -1.922 | 0.29 |
| Ethambutol3 | -0.711 | 0.777 |
| Meropenem3 | -0.701 | -0.497 |
| Vancomycin16 | -1.884 | -1.303 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | -1.984 | 1.3 |
| hypoxia_3wks | 0.55 | 1.184 |
| hypoxia_6wks | 0.549 | 2.414 |
| glycerol | 0.0 | 0.0 |
| cholesterol | 0.0 | 0.0 |
| AJ | 0.0 | 0.0 |
| Bibs02 | 0.0 | 0.0 |
| Bibs02c | 0.0 | 0.0 |
| BL6 | 0.0 | 2.634 |
| BL6a | 0.198 | 2.709 |
| BXD01 | 0.13 | 3.093 |
| BXD010 | 0.0 | 2.525 |
| BXD011 | 0.0 | 2.032 |
| BXD03 | 0.0 | 0.75 |
| BXD04 | 0.0 | 1.582 |
| BXD05 | 0.135 | 2.051 |
| BXD06 | 0.0 | 2.793 |
| BXD07 | 0.68 | 3.258 |
| BXD08 | 0.0 | 1.781 |
| BXD09 | 0.268 | 3.789 |
| CAST | 0.0 | 0.0 |
| CCcont | 1.366 | 4.141 |
| DS01 | 0.0 | 0.0 |
| DS02 | 0.0 | 0.0 |
| DS04 | 0.682 | 2.358 |
| DS0c | 0.0 | 0.0 |
| GP01 | 0.0 | 0.0 |
| GP02 | 0.0 | 0.159 |
| GP0c | 0.0 | 0.0 |
| NOD | 0.0 | 0.0 |
| NZO | 0.0 | 0.0 |
| PWK | 0.0 | 0.0 |
| H37Rv_KO_CtpC | 0.162 | 0.901 |
| H37Rv_KO_CtpD | 0.127 | 0.241 |
| H37Rv_KO_Rv1272 | 0.0 | 1.714 |
| H37Rv_KO_SugABC | 0.487 | 2.572 |
| H37Rv_KO_MbtN | 0.633 | 1.712 |
| Trans05 | 0.0 | 1.251 |
| macrophage_unactivated | -0.363 | -1.146 |
| IL1 | 0.317 | -2.515 |
| Rapamycin | -0.74 | -1.439 |
| Tcell | -0.785 | -3.812 |
| GMCSF | 0.0 | -1.545 |
| IFNab | 0.323 | 2.576 |
| IFNg | 0.286 | -2.673 |
| IFNg_GMCSF1 | 0.647 | -1.838 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 2.243 | 0.523 |
| delta_Rv3594 | 3.841 | 4.569 |
| delta_Rv3717 | 3.949 | 3.925 |
| delta_Rv3811 | 1.878 | 4.714 |
| delta_Rv0954 | 3.517 | -0.69 |
| PonA1 | 0.0 | -1.32 |
| EccD1_KO | -4.177 | -5.903 |
| EspI_KO | -2.205 | -6.0 |
| PE35_KO | -0.913 | -3.063 |
| PPE68_KO | -0.23 | -4.348 |
| glycerol2 | 0.0 | -0.744 |
| lignocerate | 0.0 | -1.218 |
| oleate | 0.0 | -1.955 |
| phosphatidylcholine | 0.0 | -1.931 |
| acetate | 0.0 | 0.422 |
| glucAc | 0.0 | -0.249 |
| Rv0950ko | -3.242 | -5.992 |
| Rv1096ko | -4.931 | -6.0 |
| Rv3684ko | -0.783 | -6.0 |
| delta_otsA_trehalose | 0.0 | -1.39 |