Top 10 genes with highest correlation to Rv2236c/cobD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1736c/narX | (cc=0.6115) | info on Rv1736c/narX |
| Rv3590c/PE_PGRS58 | (cc=0.5915) | info on Rv3590c/PE_PGRS58 |
| Rv3242c/- | (cc=0.5749) | info on Rv3242c/- |
| Rv1180/pks3 | (cc=0.5566) | info on Rv1180/pks3 |
| Rv0615/- | (cc=0.5515) | info on Rv0615/- |
| Rv1840c/PE_PGRS34 | (cc=0.5462) | info on Rv1840c/PE_PGRS34 |
| Rv3737/- | (cc=0.5228) | info on Rv3737/- |
| Rv3062/ligB | (cc=0.5186) | info on Rv3062/ligB |
| Rv2860c/glnA4 | (cc=0.5173) | info on Rv2860c/glnA4 |
| Rv0481c/- | (cc=0.5159) | info on Rv0481c/- |
Correlation of Rv2236c/cobD with Rv3590c/PE_PGRS58
Normalized LFCs for Rv2236c/cobD:
(description and provenance of datasets)
| Rv2236c/cobD | Rv3590c/PE_PGRS58 | |
| Fe_supp_jason_reseq | -0.369 | -0.863 |
| low_pH_jason_reseq | 1.057 | 0.0 |
| NO_jason_reseq | 0.845 | 0.0 |
| B6_jason_reseq | 1.09 | 0.714 |
| MHCII_jason_reseq | 0.977 | 0.27 |
| Isoniazid02 | 0.304 | 0.79 |
| Rifampicin4 | 1.438 | 1.47 |
| Ethambutol3 | 0.384 | 0.728 |
| Meropenem3 | 0.636 | 0.096 |
| Vancomycin16 | 0.48 | 0.109 |
| Rv2680_day32 | -0.359 | 0.488 |
| H37Rv_KO_MarP | -0.128 | -0.143 |
| hypoxia_3wks | -1.579 | -0.287 |
| hypoxia_6wks | -1.748 | -1.102 |
| glycerol | 0.532 | 1.273 |
| cholesterol | 0.238 | 1.279 |
| AJ | 0.425 | 1.245 |
| Bibs02 | 0.352 | 0.833 |
| Bibs02c | 0.759 | 1.082 |
| BL6 | -0.852 | -0.827 |
| BL6a | -0.67 | -0.39 |
| BXD01 | -0.153 | -0.134 |
| BXD010 | -0.986 | -0.928 |
| BXD011 | -1.612 | -1.362 |
| BXD03 | -0.732 | -0.7 |
| BXD04 | -0.1 | -0.575 |
| BXD05 | -1.516 | -0.239 |
| BXD06 | -0.537 | -1.49 |
| BXD07 | -0.857 | -1.003 |
| BXD08 | -0.513 | -0.211 |
| BXD09 | -1.369 | -0.973 |
| CAST | -0.48 | -0.279 |
| CCcont | -1.414 | -0.416 |
| DS01 | 0.226 | 0.149 |
| DS02 | 0.789 | 0.945 |
| DS04 | 1.152 | -0.065 |
| DS0c | -0.074 | 0.589 |
| GP01 | -0.304 | 0.397 |
| GP02 | 0.917 | 0.226 |
| GP0c | -1.195 | 0.251 |
| NOD | 0.049 | 0.0 |
| NZO | 0.231 | 0.302 |
| PWK | -0.463 | 0.242 |
| H37Rv_KO_CtpC | -1.777 | -1.404 |
| H37Rv_KO_CtpD | -1.753 | -0.408 |
| H37Rv_KO_Rv1272 | -1.296 | 0.234 |
| H37Rv_KO_SugABC | -1.183 | -0.215 |
| H37Rv_KO_MbtN | -1.842 | -0.816 |
| Trans05 | -0.976 | -0.608 |
| macrophage_unactivated | 0.136 | 0.079 |
| IL1 | -0.338 | -0.552 |
| Rapamycin | -0.068 | -1.025 |
| Tcell | -1.401 | 0.0 |
| GMCSF | -0.766 | 0.716 |
| IFNab | -0.345 | -0.478 |
| IFNg | -1.31 | -1.245 |
| IFNg_GMCSF1 | 0.396 | -0.584 |
| Rv1432_day32 | 1.52 | 0.516 |
| Rv1565c_day32 | 0.0 | -0.276 |
| secA2_input | -0.944 | 0.038 |
| delta_Rv3594 | 0.428 | -0.451 |
| delta_Rv3717 | -0.357 | -0.736 |
| delta_Rv3811 | 0.076 | -0.253 |
| delta_Rv0954 | 0.159 | -0.469 |
| PonA1 | 0.789 | 0.175 |
| EccD1_KO | 0.559 | 0.599 |
| EspI_KO | -1.489 | -0.739 |
| PE35_KO | -0.922 | 0.531 |
| PPE68_KO | -0.809 | 0.134 |
| glycerol2 | -0.974 | -0.27 |
| lignocerate | -0.406 | 0.426 |
| oleate | -0.549 | 0.099 |
| phosphatidylcholine | 0.115 | 0.098 |
| acetate | -0.465 | 0.387 |
| glucAc | 0.242 | 0.877 |
| Rv0950ko | 0.286 | 1.043 |
| Rv1096ko | 0.467 | 0.899 |
| Rv3684ko | -0.219 | -0.413 |
| delta_otsA_trehalose | 0.373 | -0.122 |