Top 10 genes with highest correlation to Rv2236c/cobD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1736c/narX | (cc=0.6115) | info on Rv1736c/narX |
| Rv3590c/PE_PGRS58 | (cc=0.5915) | info on Rv3590c/PE_PGRS58 |
| Rv3242c/- | (cc=0.5749) | info on Rv3242c/- |
| Rv1180/pks3 | (cc=0.5566) | info on Rv1180/pks3 |
| Rv0615/- | (cc=0.5515) | info on Rv0615/- |
| Rv1840c/PE_PGRS34 | (cc=0.5462) | info on Rv1840c/PE_PGRS34 |
| Rv3737/- | (cc=0.5228) | info on Rv3737/- |
| Rv3062/ligB | (cc=0.5186) | info on Rv3062/ligB |
| Rv2860c/glnA4 | (cc=0.5173) | info on Rv2860c/glnA4 |
| Rv0481c/- | (cc=0.5159) | info on Rv0481c/- |
Correlation of Rv2236c/cobD with Rv2860c/glnA4
Normalized LFCs for Rv2236c/cobD:
(description and provenance of datasets)
| Rv2236c/cobD | Rv2860c/glnA4 | |
| Fe_supp_jason_reseq | -0.369 | 0.272 |
| low_pH_jason_reseq | 1.057 | 0.348 |
| NO_jason_reseq | 0.845 | -0.163 |
| B6_jason_reseq | 1.09 | 1.016 |
| MHCII_jason_reseq | 0.977 | 1.38 |
| Isoniazid02 | 0.304 | 0.528 |
| Rifampicin4 | 1.438 | -0.206 |
| Ethambutol3 | 0.384 | 2.104 |
| Meropenem3 | 0.636 | 0.435 |
| Vancomycin16 | 0.48 | 0.443 |
| Rv2680_day32 | -0.359 | 0.795 |
| H37Rv_KO_MarP | -0.128 | -0.167 |
| hypoxia_3wks | -1.579 | -0.144 |
| hypoxia_6wks | -1.748 | -0.205 |
| glycerol | 0.532 | 0.878 |
| cholesterol | 0.238 | 0.406 |
| AJ | 0.425 | 0.457 |
| Bibs02 | 0.352 | -0.015 |
| Bibs02c | 0.759 | -0.033 |
| BL6 | -0.852 | -0.438 |
| BL6a | -0.67 | -0.29 |
| BXD01 | -0.153 | 0.13 |
| BXD010 | -0.986 | -0.299 |
| BXD011 | -1.612 | -0.01 |
| BXD03 | -0.732 | 0.183 |
| BXD04 | -0.1 | -0.216 |
| BXD05 | -1.516 | 0.309 |
| BXD06 | -0.537 | -0.124 |
| BXD07 | -0.857 | -0.057 |
| BXD08 | -0.513 | 0.152 |
| BXD09 | -1.369 | -0.299 |
| CAST | -0.48 | 0.279 |
| CCcont | -1.414 | -0.379 |
| DS01 | 0.226 | 1.027 |
| DS02 | 0.789 | 0.61 |
| DS04 | 1.152 | 0.904 |
| DS0c | -0.074 | 1.193 |
| GP01 | -0.304 | -0.906 |
| GP02 | 0.917 | 0.944 |
| GP0c | -1.195 | -0.984 |
| NOD | 0.049 | -0.308 |
| NZO | 0.231 | 0.535 |
| PWK | -0.463 | 0.689 |
| H37Rv_KO_CtpC | -1.777 | -0.804 |
| H37Rv_KO_CtpD | -1.753 | -1.941 |
| H37Rv_KO_Rv1272 | -1.296 | 0.109 |
| H37Rv_KO_SugABC | -1.183 | -0.325 |
| H37Rv_KO_MbtN | -1.842 | -0.907 |
| Trans05 | -0.976 | 0.292 |
| macrophage_unactivated | 0.136 | 0.679 |
| IL1 | -0.338 | 0.383 |
| Rapamycin | -0.068 | 0.147 |
| Tcell | -1.401 | -0.459 |
| GMCSF | -0.766 | 0.28 |
| IFNab | -0.345 | 0.036 |
| IFNg | -1.31 | -0.235 |
| IFNg_GMCSF1 | 0.396 | 0.151 |
| Rv1432_day32 | 1.52 | 0.738 |
| Rv1565c_day32 | 0.0 | -0.3 |
| secA2_input | -0.944 | 0.715 |
| delta_Rv3594 | 0.428 | 0.142 |
| delta_Rv3717 | -0.357 | 0.117 |
| delta_Rv3811 | 0.076 | -0.274 |
| delta_Rv0954 | 0.159 | -0.578 |
| PonA1 | 0.789 | 0.358 |
| EccD1_KO | 0.559 | 0.441 |
| EspI_KO | -1.489 | 0.168 |
| PE35_KO | -0.922 | 0.598 |
| PPE68_KO | -0.809 | 0.429 |
| glycerol2 | -0.974 | 0.158 |
| lignocerate | -0.406 | 0.138 |
| oleate | -0.549 | 0.73 |
| phosphatidylcholine | 0.115 | 0.556 |
| acetate | -0.465 | -0.1 |
| glucAc | 0.242 | -0.079 |
| Rv0950ko | 0.286 | 0.425 |
| Rv1096ko | 0.467 | 0.621 |
| Rv3684ko | -0.219 | 0.622 |
| delta_otsA_trehalose | 0.373 | 0.045 |