Top 10 genes with highest correlation to Rv2236c/cobD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1736c/narX | (cc=0.6115) | info on Rv1736c/narX |
| Rv3590c/PE_PGRS58 | (cc=0.5915) | info on Rv3590c/PE_PGRS58 |
| Rv3242c/- | (cc=0.5749) | info on Rv3242c/- |
| Rv1180/pks3 | (cc=0.5566) | info on Rv1180/pks3 |
| Rv0615/- | (cc=0.5515) | info on Rv0615/- |
| Rv1840c/PE_PGRS34 | (cc=0.5462) | info on Rv1840c/PE_PGRS34 |
| Rv3737/- | (cc=0.5228) | info on Rv3737/- |
| Rv3062/ligB | (cc=0.5186) | info on Rv3062/ligB |
| Rv2860c/glnA4 | (cc=0.5173) | info on Rv2860c/glnA4 |
| Rv0481c/- | (cc=0.5159) | info on Rv0481c/- |
Correlation of Rv2236c/cobD with Rv0615/-
Normalized LFCs for Rv2236c/cobD:
(description and provenance of datasets)
| Rv2236c/cobD | Rv0615/- | |
| Fe_supp_jason_reseq | -0.369 | 0.382 |
| low_pH_jason_reseq | 1.057 | -0.579 |
| NO_jason_reseq | 0.845 | 1.181 |
| B6_jason_reseq | 1.09 | 1.475 |
| MHCII_jason_reseq | 0.977 | 2.31 |
| Isoniazid02 | 0.304 | 0.176 |
| Rifampicin4 | 1.438 | 1.194 |
| Ethambutol3 | 0.384 | 0.305 |
| Meropenem3 | 0.636 | 0.91 |
| Vancomycin16 | 0.48 | 1.088 |
| Rv2680_day32 | -0.359 | 0.717 |
| H37Rv_KO_MarP | -0.128 | 1.798 |
| hypoxia_3wks | -1.579 | 0.738 |
| hypoxia_6wks | -1.748 | 0.152 |
| glycerol | 0.532 | -0.178 |
| cholesterol | 0.238 | -0.423 |
| AJ | 0.425 | 0.866 |
| Bibs02 | 0.352 | 0.135 |
| Bibs02c | 0.759 | 0.875 |
| BL6 | -0.852 | -0.652 |
| BL6a | -0.67 | 0.716 |
| BXD01 | -0.153 | -0.092 |
| BXD010 | -0.986 | -1.463 |
| BXD011 | -1.612 | -0.809 |
| BXD03 | -0.732 | -0.646 |
| BXD04 | -0.1 | -1.157 |
| BXD05 | -1.516 | -0.66 |
| BXD06 | -0.537 | -0.547 |
| BXD07 | -0.857 | -0.839 |
| BXD08 | -0.513 | 1.721 |
| BXD09 | -1.369 | -1.01 |
| CAST | -0.48 | 0.943 |
| CCcont | -1.414 | -0.643 |
| DS01 | 0.226 | 1.319 |
| DS02 | 0.789 | 1.434 |
| DS04 | 1.152 | 1.287 |
| DS0c | -0.074 | 1.194 |
| GP01 | -0.304 | -0.765 |
| GP02 | 0.917 | 0.811 |
| GP0c | -1.195 | -1.935 |
| NOD | 0.049 | 1.72 |
| NZO | 0.231 | 1.175 |
| PWK | -0.463 | 0.165 |
| H37Rv_KO_CtpC | -1.777 | -1.25 |
| H37Rv_KO_CtpD | -1.753 | -0.562 |
| H37Rv_KO_Rv1272 | -1.296 | -1.053 |
| H37Rv_KO_SugABC | -1.183 | 0.719 |
| H37Rv_KO_MbtN | -1.842 | -0.097 |
| Trans05 | -0.976 | -0.391 |
| macrophage_unactivated | 0.136 | 0.663 |
| IL1 | -0.338 | 0.365 |
| Rapamycin | -0.068 | 0.255 |
| Tcell | -1.401 | 0.456 |
| GMCSF | -0.766 | -0.098 |
| IFNab | -0.345 | -0.789 |
| IFNg | -1.31 | -0.468 |
| IFNg_GMCSF1 | 0.396 | -0.55 |
| Rv1432_day32 | 1.52 | 0.494 |
| Rv1565c_day32 | 0.0 | 0.1 |
| secA2_input | -0.944 | -0.211 |
| delta_Rv3594 | 0.428 | 0.173 |
| delta_Rv3717 | -0.357 | 0.793 |
| delta_Rv3811 | 0.076 | 1.16 |
| delta_Rv0954 | 0.159 | -0.333 |
| PonA1 | 0.789 | 0.323 |
| EccD1_KO | 0.559 | 0.592 |
| EspI_KO | -1.489 | -1.44 |
| PE35_KO | -0.922 | -0.324 |
| PPE68_KO | -0.809 | -0.985 |
| glycerol2 | -0.974 | 0.136 |
| lignocerate | -0.406 | 0.026 |
| oleate | -0.549 | 0.583 |
| phosphatidylcholine | 0.115 | 0.413 |
| acetate | -0.465 | -0.949 |
| glucAc | 0.242 | -0.341 |
| Rv0950ko | 0.286 | 0.965 |
| Rv1096ko | 0.467 | 0.564 |
| Rv3684ko | -0.219 | 1.369 |
| delta_otsA_trehalose | 0.373 | 1.962 |