Top 10 genes with highest correlation to Rv2205c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1468c/PE_PGRS29 | (cc=0.5487) | info on Rv1468c/PE_PGRS29 |
| Rv1992c/ctpG | (cc=0.5479) | info on Rv1992c/ctpG |
| Rv1735c/- | (cc=0.5399) | info on Rv1735c/- |
| Rv3607c/folB | (cc=0.5271) | info on Rv3607c/folB |
| Rv3344c/PE_PGRS49 | (cc=0.5265) | info on Rv3344c/PE_PGRS49 |
| Rv0578c/PE_PGRS7 | (cc=0.5229) | info on Rv0578c/PE_PGRS7 |
| Rv3367/PE_PGRS51 | (cc=0.5211) | info on Rv3367/PE_PGRS51 |
| Rv2741/PE_PGRS47 | (cc=0.5117) | info on Rv2741/PE_PGRS47 |
| Rv2030c/- | (cc=0.5101) | info on Rv2030c/- |
| Rv0332/- | (cc=0.5095) | info on Rv0332/- |
Correlation of Rv2205c/- with Rv3367/PE_PGRS51
Normalized LFCs for Rv2205c/-:
(description and provenance of datasets)
| Rv2205c/- | Rv3367/PE_PGRS51 | |
| Fe_supp_jason_reseq | 0.469 | 0.23 |
| low_pH_jason_reseq | 0.0 | -1.004 |
| NO_jason_reseq | -0.368 | -0.425 |
| B6_jason_reseq | -0.02 | 0.431 |
| MHCII_jason_reseq | 0.0 | 0.767 |
| Isoniazid02 | 0.646 | -0.198 |
| Rifampicin4 | 0.455 | -0.043 |
| Ethambutol3 | 0.845 | 1.115 |
| Meropenem3 | 1.636 | 1.859 |
| Vancomycin16 | -0.329 | -0.088 |
| Rv2680_day32 | -0.144 | 0.055 |
| H37Rv_KO_MarP | 0.704 | 0.192 |
| hypoxia_3wks | -0.367 | -0.359 |
| hypoxia_6wks | -1.161 | 0.263 |
| glycerol | 0.13 | 0.802 |
| cholesterol | -0.108 | 0.504 |
| AJ | 0.602 | 0.513 |
| Bibs02 | 0.07 | 0.481 |
| Bibs02c | 0.294 | 0.55 |
| BL6 | -0.654 | -0.639 |
| BL6a | 0.108 | -0.22 |
| BXD01 | -0.014 | -0.524 |
| BXD010 | -0.483 | -0.809 |
| BXD011 | -0.854 | -0.98 |
| BXD03 | -0.151 | -0.671 |
| BXD04 | 0.179 | -0.497 |
| BXD05 | -0.192 | -0.524 |
| BXD06 | -0.422 | -0.76 |
| BXD07 | -0.468 | -0.853 |
| BXD08 | -0.342 | -0.569 |
| BXD09 | -0.402 | -0.78 |
| CAST | 0.324 | 0.409 |
| CCcont | -0.767 | -0.679 |
| DS01 | 0.388 | 0.419 |
| DS02 | 0.621 | 0.616 |
| DS04 | 0.822 | 0.195 |
| DS0c | 0.047 | -0.178 |
| GP01 | 0.763 | 0.41 |
| GP02 | 0.318 | 0.546 |
| GP0c | 0.332 | 0.191 |
| NOD | 0.464 | -0.184 |
| NZO | 0.535 | 1.272 |
| PWK | -0.112 | 0.288 |
| H37Rv_KO_CtpC | -0.112 | -0.044 |
| H37Rv_KO_CtpD | -0.628 | 0.157 |
| H37Rv_KO_Rv1272 | 0.245 | 0.291 |
| H37Rv_KO_SugABC | -0.574 | -0.072 |
| H37Rv_KO_MbtN | 1.578 | 0.833 |
| Trans05 | 0.078 | 0.326 |
| macrophage_unactivated | -0.735 | -1.095 |
| IL1 | -0.86 | -0.976 |
| Rapamycin | -0.994 | -0.5 |
| Tcell | -0.583 | -1.307 |
| GMCSF | 0.024 | -1.011 |
| IFNab | -0.774 | -1.103 |
| IFNg | -0.898 | -1.328 |
| IFNg_GMCSF1 | 0.421 | -0.462 |
| Rv1432_day32 | -0.541 | 2.471 |
| Rv1565c_day32 | 0.117 | 0.4 |
| secA2_input | -0.645 | 0.398 |
| delta_Rv3594 | 0.489 | 0.321 |
| delta_Rv3717 | 0.228 | -0.126 |
| delta_Rv3811 | 1.023 | -0.385 |
| delta_Rv0954 | 0.213 | -0.057 |
| PonA1 | 0.309 | 0.357 |
| EccD1_KO | 0.506 | 0.273 |
| EspI_KO | 0.499 | -0.123 |
| PE35_KO | 0.07 | -0.496 |
| PPE68_KO | -0.106 | -0.659 |
| glycerol2 | -0.957 | -0.552 |
| lignocerate | -0.578 | -0.058 |
| oleate | -0.242 | -0.186 |
| phosphatidylcholine | -0.422 | 0.209 |
| acetate | -0.678 | -0.655 |
| glucAc | -0.955 | -0.266 |
| Rv0950ko | 0.694 | 0.0 |
| Rv1096ko | -0.259 | 0.202 |
| Rv3684ko | 0.265 | 0.658 |
| delta_otsA_trehalose | 0.673 | 0.306 |