Top 10 genes with highest correlation to Rv2205c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1468c/PE_PGRS29 | (cc=0.5487) | info on Rv1468c/PE_PGRS29 |
| Rv1992c/ctpG | (cc=0.5479) | info on Rv1992c/ctpG |
| Rv1735c/- | (cc=0.5399) | info on Rv1735c/- |
| Rv3607c/folB | (cc=0.5271) | info on Rv3607c/folB |
| Rv3344c/PE_PGRS49 | (cc=0.5265) | info on Rv3344c/PE_PGRS49 |
| Rv0578c/PE_PGRS7 | (cc=0.5229) | info on Rv0578c/PE_PGRS7 |
| Rv3367/PE_PGRS51 | (cc=0.5211) | info on Rv3367/PE_PGRS51 |
| Rv2741/PE_PGRS47 | (cc=0.5117) | info on Rv2741/PE_PGRS47 |
| Rv2030c/- | (cc=0.5101) | info on Rv2030c/- |
| Rv0332/- | (cc=0.5095) | info on Rv0332/- |
Correlation of Rv2205c/- with Rv2741/PE_PGRS47
Normalized LFCs for Rv2205c/-:
(description and provenance of datasets)
| Rv2205c/- | Rv2741/PE_PGRS47 | |
| Fe_supp_jason_reseq | 0.469 | -1.435 |
| low_pH_jason_reseq | 0.0 | -1.683 |
| NO_jason_reseq | -0.368 | -0.719 |
| B6_jason_reseq | -0.02 | 0.291 |
| MHCII_jason_reseq | 0.0 | 1.197 |
| Isoniazid02 | 0.646 | -0.143 |
| Rifampicin4 | 0.455 | 0.225 |
| Ethambutol3 | 0.845 | 0.344 |
| Meropenem3 | 1.636 | 0.43 |
| Vancomycin16 | -0.329 | 0.098 |
| Rv2680_day32 | -0.144 | 0.415 |
| H37Rv_KO_MarP | 0.704 | -0.251 |
| hypoxia_3wks | -0.367 | -0.869 |
| hypoxia_6wks | -1.161 | -0.971 |
| glycerol | 0.13 | -0.105 |
| cholesterol | -0.108 | 0.0 |
| AJ | 0.602 | 0.087 |
| Bibs02 | 0.07 | 0.548 |
| Bibs02c | 0.294 | 0.461 |
| BL6 | -0.654 | -1.25 |
| BL6a | 0.108 | -0.532 |
| BXD01 | -0.014 | -0.626 |
| BXD010 | -0.483 | -0.078 |
| BXD011 | -0.854 | -0.691 |
| BXD03 | -0.151 | -0.752 |
| BXD04 | 0.179 | -0.645 |
| BXD05 | -0.192 | -0.438 |
| BXD06 | -0.422 | -0.961 |
| BXD07 | -0.468 | -0.702 |
| BXD08 | -0.342 | -0.871 |
| BXD09 | -0.402 | -0.666 |
| CAST | 0.324 | 0.467 |
| CCcont | -0.767 | -1.508 |
| DS01 | 0.388 | 0.257 |
| DS02 | 0.621 | 0.61 |
| DS04 | 0.822 | 0.672 |
| DS0c | 0.047 | 0.434 |
| GP01 | 0.763 | 0.75 |
| GP02 | 0.318 | 1.507 |
| GP0c | 0.332 | -0.028 |
| NOD | 0.464 | 0.226 |
| NZO | 0.535 | 0.131 |
| PWK | -0.112 | 0.182 |
| H37Rv_KO_CtpC | -0.112 | -0.481 |
| H37Rv_KO_CtpD | -0.628 | 0.783 |
| H37Rv_KO_Rv1272 | 0.245 | 0.163 |
| H37Rv_KO_SugABC | -0.574 | -0.866 |
| H37Rv_KO_MbtN | 1.578 | -0.39 |
| Trans05 | 0.078 | -0.387 |
| macrophage_unactivated | -0.735 | -1.203 |
| IL1 | -0.86 | -0.819 |
| Rapamycin | -0.994 | -0.746 |
| Tcell | -0.583 | -1.124 |
| GMCSF | 0.024 | -0.177 |
| IFNab | -0.774 | -0.834 |
| IFNg | -0.898 | -1.577 |
| IFNg_GMCSF1 | 0.421 | 0.0 |
| Rv1432_day32 | -0.541 | 0.329 |
| Rv1565c_day32 | 0.117 | -0.392 |
| secA2_input | -0.645 | 0.16 |
| delta_Rv3594 | 0.489 | 0.722 |
| delta_Rv3717 | 0.228 | 0.278 |
| delta_Rv3811 | 1.023 | 0.181 |
| delta_Rv0954 | 0.213 | 0.168 |
| PonA1 | 0.309 | 0.009 |
| EccD1_KO | 0.506 | 0.595 |
| EspI_KO | 0.499 | 0.699 |
| PE35_KO | 0.07 | 0.869 |
| PPE68_KO | -0.106 | 1.165 |
| glycerol2 | -0.957 | -0.673 |
| lignocerate | -0.578 | -0.905 |
| oleate | -0.242 | -0.189 |
| phosphatidylcholine | -0.422 | -0.8 |
| acetate | -0.678 | -0.798 |
| glucAc | -0.955 | -0.255 |
| Rv0950ko | 0.694 | 0.35 |
| Rv1096ko | -0.259 | -0.534 |
| Rv3684ko | 0.265 | 0.92 |
| delta_otsA_trehalose | 0.673 | -0.53 |