Top 10 genes with highest correlation to Rv2205c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1468c/PE_PGRS29 | (cc=0.5487) | info on Rv1468c/PE_PGRS29 |
| Rv1992c/ctpG | (cc=0.5479) | info on Rv1992c/ctpG |
| Rv1735c/- | (cc=0.5399) | info on Rv1735c/- |
| Rv3607c/folB | (cc=0.5271) | info on Rv3607c/folB |
| Rv3344c/PE_PGRS49 | (cc=0.5265) | info on Rv3344c/PE_PGRS49 |
| Rv0578c/PE_PGRS7 | (cc=0.5229) | info on Rv0578c/PE_PGRS7 |
| Rv3367/PE_PGRS51 | (cc=0.5211) | info on Rv3367/PE_PGRS51 |
| Rv2741/PE_PGRS47 | (cc=0.5117) | info on Rv2741/PE_PGRS47 |
| Rv2030c/- | (cc=0.5101) | info on Rv2030c/- |
| Rv0332/- | (cc=0.5095) | info on Rv0332/- |
Correlation of Rv2205c/- with Rv1468c/PE_PGRS29
Normalized LFCs for Rv2205c/-:
(description and provenance of datasets)
| Rv2205c/- | Rv1468c/PE_PGRS29 | |
| Fe_supp_jason_reseq | 0.469 | 0.425 |
| low_pH_jason_reseq | 0.0 | 0.274 |
| NO_jason_reseq | -0.368 | -1.229 |
| B6_jason_reseq | -0.02 | -0.718 |
| MHCII_jason_reseq | 0.0 | -0.801 |
| Isoniazid02 | 0.646 | 0.303 |
| Rifampicin4 | 0.455 | 1.968 |
| Ethambutol3 | 0.845 | 1.278 |
| Meropenem3 | 1.636 | 1.473 |
| Vancomycin16 | -0.329 | 0.43 |
| Rv2680_day32 | -0.144 | -0.64 |
| H37Rv_KO_MarP | 0.704 | -0.049 |
| hypoxia_3wks | -0.367 | -0.694 |
| hypoxia_6wks | -1.161 | -0.735 |
| glycerol | 0.13 | 0.0 |
| cholesterol | -0.108 | -0.388 |
| AJ | 0.602 | 1.612 |
| Bibs02 | 0.07 | 0.389 |
| Bibs02c | 0.294 | 0.0 |
| BL6 | -0.654 | -0.835 |
| BL6a | 0.108 | 0.0 |
| BXD01 | -0.014 | 0.235 |
| BXD010 | -0.483 | -0.675 |
| BXD011 | -0.854 | -0.078 |
| BXD03 | -0.151 | -0.2 |
| BXD04 | 0.179 | 0.024 |
| BXD05 | -0.192 | 0.308 |
| BXD06 | -0.422 | -0.428 |
| BXD07 | -0.468 | 0.339 |
| BXD08 | -0.342 | 0.519 |
| BXD09 | -0.402 | 0.054 |
| CAST | 0.324 | 0.415 |
| CCcont | -0.767 | 0.168 |
| DS01 | 0.388 | 0.652 |
| DS02 | 0.621 | 0.789 |
| DS04 | 0.822 | 1.835 |
| DS0c | 0.047 | -0.178 |
| GP01 | 0.763 | 1.93 |
| GP02 | 0.318 | 0.863 |
| GP0c | 0.332 | 1.155 |
| NOD | 0.464 | -0.436 |
| NZO | 0.535 | 0.751 |
| PWK | -0.112 | 0.254 |
| H37Rv_KO_CtpC | -0.112 | 1.094 |
| H37Rv_KO_CtpD | -0.628 | 2.032 |
| H37Rv_KO_Rv1272 | 0.245 | 1.204 |
| H37Rv_KO_SugABC | -0.574 | 0.346 |
| H37Rv_KO_MbtN | 1.578 | 1.692 |
| Trans05 | 0.078 | -0.193 |
| macrophage_unactivated | -0.735 | -0.117 |
| IL1 | -0.86 | -0.169 |
| Rapamycin | -0.994 | -0.608 |
| Tcell | -0.583 | 0.059 |
| GMCSF | 0.024 | 0.143 |
| IFNab | -0.774 | -0.599 |
| IFNg | -0.898 | -1.141 |
| IFNg_GMCSF1 | 0.421 | 0.798 |
| Rv1432_day32 | -0.541 | 0.07 |
| Rv1565c_day32 | 0.117 | -1.33 |
| secA2_input | -0.645 | -0.462 |
| delta_Rv3594 | 0.489 | 0.6 |
| delta_Rv3717 | 0.228 | 0.865 |
| delta_Rv3811 | 1.023 | 0.708 |
| delta_Rv0954 | 0.213 | 1.499 |
| PonA1 | 0.309 | 0.99 |
| EccD1_KO | 0.506 | -0.523 |
| EspI_KO | 0.499 | -0.787 |
| PE35_KO | 0.07 | -0.505 |
| PPE68_KO | -0.106 | -0.291 |
| glycerol2 | -0.957 | -0.22 |
| lignocerate | -0.578 | 0.033 |
| oleate | -0.242 | 0.057 |
| phosphatidylcholine | -0.422 | -0.262 |
| acetate | -0.678 | -0.163 |
| glucAc | -0.955 | -0.491 |
| Rv0950ko | 0.694 | 0.202 |
| Rv1096ko | -0.259 | -0.127 |
| Rv3684ko | 0.265 | 0.177 |
| delta_otsA_trehalose | 0.673 | 0.284 |