Top 10 genes with highest correlation to Rv2174/mptA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2913c/- | (cc=0.6192) | info on Rv2913c/- |
| Rv0910/- | (cc=0.5481) | info on Rv0910/- |
| Rv3038c/- | (cc=0.5363) | info on Rv3038c/- |
| Rv1973/- | (cc=0.5328) | info on Rv1973/- |
| Rv2125/- | (cc=0.5193) | info on Rv2125/- |
| Rv3041c/- | (cc=0.5083) | info on Rv3041c/- |
| Rv1276c/- | (cc=0.4992) | info on Rv1276c/- |
| Rv0036c/- | (cc=0.4965) | info on Rv0036c/- |
| Rv1064c/lpqV | (cc=0.4921) | info on Rv1064c/lpqV |
| Rv3170/aofH | (cc=0.4753) | info on Rv3170/aofH |
Correlation of Rv2174/mptA with Rv3041c/-
Normalized LFCs for Rv2174/mptA:
(description and provenance of datasets)
| Rv2174/mptA | Rv3041c/- | |
| Fe_supp_jason_reseq | 1.07 | 0.207 |
| low_pH_jason_reseq | -0.539 | 0.547 |
| NO_jason_reseq | 0.244 | 0.118 |
| B6_jason_reseq | 0.685 | -0.575 |
| MHCII_jason_reseq | 0.406 | -0.572 |
| Isoniazid02 | 0.23 | 1.055 |
| Rifampicin4 | -0.653 | -0.769 |
| Ethambutol3 | 0.841 | -0.721 |
| Meropenem3 | -0.951 | -0.552 |
| Vancomycin16 | -0.47 | -0.207 |
| Rv2680_day32 | -1.824 | -1.231 |
| H37Rv_KO_MarP | -0.073 | 0.624 |
| hypoxia_3wks | 1.013 | -1.033 |
| hypoxia_6wks | -0.119 | -2.42 |
| glycerol | 0.0 | 0.471 |
| cholesterol | 0.154 | 0.02 |
| AJ | 0.0 | -1.681 |
| Bibs02 | -0.376 | -0.103 |
| Bibs02c | 0.152 | -0.029 |
| BL6 | -0.315 | -0.776 |
| BL6a | -0.595 | -1.131 |
| BXD01 | -0.154 | -1.312 |
| BXD010 | -0.519 | -0.643 |
| BXD011 | -1.021 | -0.821 |
| BXD03 | -0.624 | -0.592 |
| BXD04 | -0.992 | -1.725 |
| BXD05 | -0.405 | -2.026 |
| BXD06 | -0.967 | -0.67 |
| BXD07 | -1.003 | -1.298 |
| BXD08 | -1.177 | 0.0 |
| BXD09 | -0.422 | -1.057 |
| CAST | 0.0 | -0.651 |
| CCcont | -0.779 | -0.449 |
| DS01 | 0.479 | -0.464 |
| DS02 | -0.257 | -0.287 |
| DS04 | -0.312 | -0.138 |
| DS0c | -0.082 | -0.03 |
| GP01 | 0.769 | -1.378 |
| GP02 | -0.134 | -1.002 |
| GP0c | 0.815 | -1.263 |
| NOD | -0.675 | -1.23 |
| NZO | -0.41 | -2.008 |
| PWK | -0.074 | 0.131 |
| H37Rv_KO_CtpC | 0.118 | -1.09 |
| H37Rv_KO_CtpD | -1.237 | -0.581 |
| H37Rv_KO_Rv1272 | -1.248 | -0.059 |
| H37Rv_KO_SugABC | 0.699 | 0.704 |
| H37Rv_KO_MbtN | 0.209 | 1.408 |
| Trans05 | -0.21 | -1.316 |
| macrophage_unactivated | -0.234 | -1.016 |
| IL1 | -0.955 | -0.872 |
| Rapamycin | -1.274 | -1.436 |
| Tcell | -0.762 | -0.701 |
| GMCSF | -1.096 | -2.82 |
| IFNab | 0.0 | -1.146 |
| IFNg | -0.861 | -1.593 |
| IFNg_GMCSF1 | -1.012 | -1.282 |
| Rv1432_day32 | -0.222 | -1.358 |
| Rv1565c_day32 | 0.0 | 0.466 |
| secA2_input | 0.675 | -0.933 |
| delta_Rv3594 | 1.366 | 2.145 |
| delta_Rv3717 | 1.384 | 1.593 |
| delta_Rv3811 | 2.357 | 1.563 |
| delta_Rv0954 | 0.925 | 1.973 |
| PonA1 | 0.419 | 0.675 |
| EccD1_KO | 1.365 | 0.855 |
| EspI_KO | -1.035 | 0.134 |
| PE35_KO | 1.21 | 0.268 |
| PPE68_KO | 1.133 | 0.998 |
| glycerol2 | -0.231 | -1.216 |
| lignocerate | -0.913 | -1.812 |
| oleate | 0.159 | -0.618 |
| phosphatidylcholine | -0.171 | -0.611 |
| acetate | -1.358 | -0.67 |
| glucAc | -1.809 | -1.367 |
| Rv0950ko | 0.211 | -0.326 |
| Rv1096ko | -0.706 | 0.742 |
| Rv3684ko | -1.055 | 0.19 |
| delta_otsA_trehalose | -0.254 | -0.254 |