Top 10 genes with highest correlation to Rv2174/mptA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2913c/- | (cc=0.6192) | info on Rv2913c/- |
| Rv0910/- | (cc=0.5481) | info on Rv0910/- |
| Rv3038c/- | (cc=0.5363) | info on Rv3038c/- |
| Rv1973/- | (cc=0.5328) | info on Rv1973/- |
| Rv2125/- | (cc=0.5193) | info on Rv2125/- |
| Rv3041c/- | (cc=0.5083) | info on Rv3041c/- |
| Rv1276c/- | (cc=0.4992) | info on Rv1276c/- |
| Rv0036c/- | (cc=0.4965) | info on Rv0036c/- |
| Rv1064c/lpqV | (cc=0.4921) | info on Rv1064c/lpqV |
| Rv3170/aofH | (cc=0.4753) | info on Rv3170/aofH |
Correlation of Rv2174/mptA with Rv2125/-
Normalized LFCs for Rv2174/mptA:
(description and provenance of datasets)
| Rv2174/mptA | Rv2125/- | |
| Fe_supp_jason_reseq | 1.07 | 0.845 |
| low_pH_jason_reseq | -0.539 | -0.231 |
| NO_jason_reseq | 0.244 | -0.11 |
| B6_jason_reseq | 0.685 | 0.428 |
| MHCII_jason_reseq | 0.406 | 0.874 |
| Isoniazid02 | 0.23 | 1.013 |
| Rifampicin4 | -0.653 | -0.171 |
| Ethambutol3 | 0.841 | 0.06 |
| Meropenem3 | -0.951 | 0.159 |
| Vancomycin16 | -0.47 | -0.106 |
| Rv2680_day32 | -1.824 | -0.055 |
| H37Rv_KO_MarP | -0.073 | 0.876 |
| hypoxia_3wks | 1.013 | 0.0 |
| hypoxia_6wks | -0.119 | -0.299 |
| glycerol | 0.0 | 1.122 |
| cholesterol | 0.154 | 0.722 |
| AJ | 0.0 | 0.368 |
| Bibs02 | -0.376 | -0.371 |
| Bibs02c | 0.152 | 0.394 |
| BL6 | -0.315 | -1.865 |
| BL6a | -0.595 | -0.342 |
| BXD01 | -0.154 | -1.648 |
| BXD010 | -0.519 | -1.35 |
| BXD011 | -1.021 | -1.534 |
| BXD03 | -0.624 | -1.12 |
| BXD04 | -0.992 | -1.647 |
| BXD05 | -0.405 | -0.946 |
| BXD06 | -0.967 | -1.222 |
| BXD07 | -1.003 | -1.3 |
| BXD08 | -1.177 | -1.139 |
| BXD09 | -0.422 | -1.068 |
| CAST | 0.0 | -0.661 |
| CCcont | -0.779 | -1.205 |
| DS01 | 0.479 | 0.022 |
| DS02 | -0.257 | -0.391 |
| DS04 | -0.312 | 0.475 |
| DS0c | -0.082 | -0.035 |
| GP01 | 0.769 | 0.67 |
| GP02 | -0.134 | 0.046 |
| GP0c | 0.815 | 0.522 |
| NOD | -0.675 | 0.145 |
| NZO | -0.41 | -0.539 |
| PWK | -0.074 | -0.826 |
| H37Rv_KO_CtpC | 0.118 | -1.043 |
| H37Rv_KO_CtpD | -1.237 | -1.512 |
| H37Rv_KO_Rv1272 | -1.248 | -1.109 |
| H37Rv_KO_SugABC | 0.699 | 0.948 |
| H37Rv_KO_MbtN | 0.209 | 0.311 |
| Trans05 | -0.21 | -1.4 |
| macrophage_unactivated | -0.234 | 0.249 |
| IL1 | -0.955 | -0.024 |
| Rapamycin | -1.274 | 0.43 |
| Tcell | -0.762 | -0.971 |
| GMCSF | -1.096 | 0.042 |
| IFNab | 0.0 | 0.239 |
| IFNg | -0.861 | -0.224 |
| IFNg_GMCSF1 | -1.012 | 0.575 |
| Rv1432_day32 | -0.222 | 0.095 |
| Rv1565c_day32 | 0.0 | 0.485 |
| secA2_input | 0.675 | 0.106 |
| delta_Rv3594 | 1.366 | 0.965 |
| delta_Rv3717 | 1.384 | 1.072 |
| delta_Rv3811 | 2.357 | 1.184 |
| delta_Rv0954 | 0.925 | 1.26 |
| PonA1 | 0.419 | 0.965 |
| EccD1_KO | 1.365 | 0.562 |
| EspI_KO | -1.035 | 0.502 |
| PE35_KO | 1.21 | 0.16 |
| PPE68_KO | 1.133 | 0.474 |
| glycerol2 | -0.231 | -1.033 |
| lignocerate | -0.913 | -0.669 |
| oleate | 0.159 | -0.88 |
| phosphatidylcholine | -0.171 | -0.819 |
| acetate | -1.358 | 0.318 |
| glucAc | -1.809 | 0.0 |
| Rv0950ko | 0.211 | -0.151 |
| Rv1096ko | -0.706 | 0.106 |
| Rv3684ko | -1.055 | -0.747 |
| delta_otsA_trehalose | -0.254 | 0.132 |