Top 10 genes with highest correlation to Rv2174/mptA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2913c/- | (cc=0.6192) | info on Rv2913c/- |
| Rv0910/- | (cc=0.5481) | info on Rv0910/- |
| Rv3038c/- | (cc=0.5363) | info on Rv3038c/- |
| Rv1973/- | (cc=0.5328) | info on Rv1973/- |
| Rv2125/- | (cc=0.5193) | info on Rv2125/- |
| Rv3041c/- | (cc=0.5083) | info on Rv3041c/- |
| Rv1276c/- | (cc=0.4992) | info on Rv1276c/- |
| Rv0036c/- | (cc=0.4965) | info on Rv0036c/- |
| Rv1064c/lpqV | (cc=0.4921) | info on Rv1064c/lpqV |
| Rv3170/aofH | (cc=0.4753) | info on Rv3170/aofH |
Correlation of Rv2174/mptA with Rv1973/-
Normalized LFCs for Rv2174/mptA:
(description and provenance of datasets)
| Rv2174/mptA | Rv1973/- | |
| Fe_supp_jason_reseq | 1.07 | -0.881 |
| low_pH_jason_reseq | -0.539 | 1.139 |
| NO_jason_reseq | 0.244 | 1.339 |
| B6_jason_reseq | 0.685 | 0.457 |
| MHCII_jason_reseq | 0.406 | 0.984 |
| Isoniazid02 | 0.23 | 0.33 |
| Rifampicin4 | -0.653 | 0.712 |
| Ethambutol3 | 0.841 | 0.061 |
| Meropenem3 | -0.951 | -0.217 |
| Vancomycin16 | -0.47 | 0.846 |
| Rv2680_day32 | -1.824 | -0.459 |
| H37Rv_KO_MarP | -0.073 | 0.048 |
| hypoxia_3wks | 1.013 | 0.307 |
| hypoxia_6wks | -0.119 | -0.084 |
| glycerol | 0.0 | 0.638 |
| cholesterol | 0.154 | -0.659 |
| AJ | 0.0 | 0.417 |
| Bibs02 | -0.376 | 0.404 |
| Bibs02c | 0.152 | -1.55 |
| BL6 | -0.315 | -1.047 |
| BL6a | -0.595 | -1.296 |
| BXD01 | -0.154 | -1.28 |
| BXD010 | -0.519 | -1.968 |
| BXD011 | -1.021 | -2.528 |
| BXD03 | -0.624 | -2.961 |
| BXD04 | -0.992 | -2.129 |
| BXD05 | -0.405 | -2.528 |
| BXD06 | -0.967 | -2.26 |
| BXD07 | -1.003 | -2.384 |
| BXD08 | -1.177 | -0.474 |
| BXD09 | -0.422 | -2.092 |
| CAST | 0.0 | 0.038 |
| CCcont | -0.779 | -2.059 |
| DS01 | 0.479 | 0.879 |
| DS02 | -0.257 | -0.775 |
| DS04 | -0.312 | -1.095 |
| DS0c | -0.082 | -0.382 |
| GP01 | 0.769 | 0.942 |
| GP02 | -0.134 | 1.323 |
| GP0c | 0.815 | 1.077 |
| NOD | -0.675 | 0.652 |
| NZO | -0.41 | 0.63 |
| PWK | -0.074 | 0.369 |
| H37Rv_KO_CtpC | 0.118 | -1.15 |
| H37Rv_KO_CtpD | -1.237 | -1.694 |
| H37Rv_KO_Rv1272 | -1.248 | -2.388 |
| H37Rv_KO_SugABC | 0.699 | -2.545 |
| H37Rv_KO_MbtN | 0.209 | 0.929 |
| Trans05 | -0.21 | -0.827 |
| macrophage_unactivated | -0.234 | -0.082 |
| IL1 | -0.955 | -2.317 |
| Rapamycin | -1.274 | -3.861 |
| Tcell | -0.762 | -0.74 |
| GMCSF | -1.096 | -2.184 |
| IFNab | 0.0 | -0.877 |
| IFNg | -0.861 | -1.424 |
| IFNg_GMCSF1 | -1.012 | -0.616 |
| Rv1432_day32 | -0.222 | -0.604 |
| Rv1565c_day32 | 0.0 | -1.071 |
| secA2_input | 0.675 | 1.531 |
| delta_Rv3594 | 1.366 | 0.213 |
| delta_Rv3717 | 1.384 | 0.194 |
| delta_Rv3811 | 2.357 | 2.074 |
| delta_Rv0954 | 0.925 | 1.729 |
| PonA1 | 0.419 | 0.605 |
| EccD1_KO | 1.365 | 1.411 |
| EspI_KO | -1.035 | 0.268 |
| PE35_KO | 1.21 | -1.158 |
| PPE68_KO | 1.133 | -0.227 |
| glycerol2 | -0.231 | -0.374 |
| lignocerate | -0.913 | -0.861 |
| oleate | 0.159 | 0.642 |
| phosphatidylcholine | -0.171 | -0.405 |
| acetate | -1.358 | -1.011 |
| glucAc | -1.809 | -1.015 |
| Rv0950ko | 0.211 | -0.157 |
| Rv1096ko | -0.706 | 0.226 |
| Rv3684ko | -1.055 | -1.074 |
| delta_otsA_trehalose | -0.254 | -0.11 |