Top 10 genes with highest correlation to Rv2170/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1006/- | (cc=0.6425) | info on Rv1006/- |
| Rv2363/amiA2 | (cc=0.5989) | info on Rv2363/amiA2 |
| Rv0361/- | (cc=0.5743) | info on Rv0361/- |
| Rv2051c/ppm1 | (cc=0.5656) | info on Rv2051c/ppm1 |
| Rv2171/lppM | (cc=0.5652) | info on Rv2171/lppM |
| Rv0999/- | (cc=0.5513) | info on Rv0999/- |
| Rv2710/sigB | (cc=0.5437) | info on Rv2710/sigB |
| Rv1860/apa | (cc=0.5352) | info on Rv1860/apa |
| Rv0561c/- | (cc=0.5254) | info on Rv0561c/- |
| Rv2869c/rip | (cc=0.524) | info on Rv2869c/rip |
Correlation of Rv2170/- with Rv0361/-
Normalized LFCs for Rv2170/-:
(description and provenance of datasets)
| Rv2170/- | Rv0361/- | |
| Fe_supp_jason_reseq | 2.939 | 1.163 |
| low_pH_jason_reseq | -0.231 | -0.44 |
| NO_jason_reseq | -1.205 | -0.69 |
| B6_jason_reseq | -0.842 | 0.128 |
| MHCII_jason_reseq | 0.0 | -0.123 |
| Isoniazid02 | -0.79 | -0.506 |
| Rifampicin4 | -5.992 | -4.291 |
| Ethambutol3 | -0.494 | 1.108 |
| Meropenem3 | -0.889 | -0.525 |
| Vancomycin16 | -1.125 | -3.242 |
| Rv2680_day32 | -1.871 | -0.116 |
| H37Rv_KO_MarP | -2.007 | 0.02 |
| hypoxia_3wks | -0.77 | -2.333 |
| hypoxia_6wks | -2.088 | -1.771 |
| glycerol | 1.056 | 1.306 |
| cholesterol | 2.127 | 2.783 |
| AJ | -1.14 | 0.866 |
| Bibs02 | -1.325 | -1.619 |
| Bibs02c | 0.774 | 0.887 |
| BL6 | -1.687 | -1.346 |
| BL6a | -1.058 | -1.435 |
| BXD01 | -1.529 | -0.944 |
| BXD010 | -1.728 | -1.378 |
| BXD011 | -1.603 | -0.099 |
| BXD03 | -1.701 | -1.084 |
| BXD04 | -1.792 | -1.33 |
| BXD05 | -1.477 | -1.314 |
| BXD06 | -1.68 | -1.436 |
| BXD07 | -1.419 | -1.11 |
| BXD08 | -1.927 | -1.299 |
| BXD09 | -1.018 | -1.127 |
| CAST | -1.036 | -0.581 |
| CCcont | -0.164 | 0.393 |
| DS01 | -1.16 | -0.956 |
| DS02 | -1.161 | 0.753 |
| DS04 | -1.307 | -1.134 |
| DS0c | 0.68 | 0.303 |
| GP01 | -0.368 | -0.117 |
| GP02 | 0.462 | -0.667 |
| GP0c | -0.752 | -0.678 |
| NOD | 0.428 | -1.172 |
| NZO | -2.189 | -1.166 |
| PWK | -0.732 | -1.147 |
| H37Rv_KO_CtpC | 0.631 | 0.843 |
| H37Rv_KO_CtpD | -0.255 | -0.098 |
| H37Rv_KO_Rv1272 | -1.261 | -1.248 |
| H37Rv_KO_SugABC | -1.336 | -0.579 |
| H37Rv_KO_MbtN | -0.644 | -0.417 |
| Trans05 | 0.034 | -1.276 |
| macrophage_unactivated | 0.0 | 0.338 |
| IL1 | 0.0 | -0.715 |
| Rapamycin | 0.936 | 0.0 |
| Tcell | 0.0 | -1.235 |
| GMCSF | 0.618 | -1.001 |
| IFNab | 0.922 | -1.146 |
| IFNg | 0.428 | -0.644 |
| IFNg_GMCSF1 | 0.958 | -0.361 |
| Rv1432_day32 | -1.304 | -0.263 |
| Rv1565c_day32 | -0.502 | 3.159 |
| secA2_input | 0.479 | -0.568 |
| delta_Rv3594 | -0.746 | 0.428 |
| delta_Rv3717 | -0.773 | -1.016 |
| delta_Rv3811 | 0.541 | 0.076 |
| delta_Rv0954 | 1.149 | 0.842 |
| PonA1 | 0.328 | 2.409 |
| EccD1_KO | -1.713 | 0.319 |
| EspI_KO | -0.676 | 1.038 |
| PE35_KO | -0.805 | 0.855 |
| PPE68_KO | -0.637 | 0.995 |
| glycerol2 | -1.159 | -0.891 |
| lignocerate | -0.353 | -0.712 |
| oleate | -1.381 | -3.737 |
| phosphatidylcholine | -0.913 | -0.685 |
| acetate | -0.825 | -1.057 |
| glucAc | -1.236 | -1.921 |
| Rv0950ko | -1.634 | -1.532 |
| Rv1096ko | -1.176 | 0.498 |
| Rv3684ko | 0.671 | 2.486 |
| delta_otsA_trehalose | 0.243 | 1.179 |