Top 10 genes with highest correlation to Rv2142c/parE2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2958c/- | (cc=0.63) | info on Rv2958c/- |
| Rv1814/erg3 | (cc=0.6115) | info on Rv1814/erg3 |
| Rv1523/- | (cc=0.5781) | info on Rv1523/- |
| Rv2550c/vapB20 | (cc=0.543) | info on Rv2550c/vapB20 |
| Rv0755A/- | (cc=0.5426) | info on Rv0755A/- |
| Rv1071c/echA9 | (cc=0.5367) | info on Rv1071c/echA9 |
| Rv3065/mmr | (cc=0.5107) | info on Rv3065/mmr |
| Rv3691/- | (cc=0.501) | info on Rv3691/- |
| Rv2768c/PPE43 | (cc=0.498) | info on Rv2768c/PPE43 |
| Rv0346c/ansP2 | (cc=0.4873) | info on Rv0346c/ansP2 |
Correlation of Rv2142c/parE2 with Rv3065/mmr
Normalized LFCs for Rv2142c/parE2:
(description and provenance of datasets)
| Rv2142c/parE2 | Rv3065/mmr | |
| Fe_supp_jason_reseq | -1.225 | -0.647 |
| low_pH_jason_reseq | -0.974 | -1.335 |
| NO_jason_reseq | -0.543 | -0.911 |
| B6_jason_reseq | -0.423 | -0.65 |
| MHCII_jason_reseq | 0.684 | 0.12 |
| Isoniazid02 | 0.112 | -1.314 |
| Rifampicin4 | 0.133 | -0.301 |
| Ethambutol3 | 1.125 | 0.24 |
| Meropenem3 | 0.327 | -1.063 |
| Vancomycin16 | -0.263 | -1.149 |
| Rv2680_day32 | 0.358 | 0.75 |
| H37Rv_KO_MarP | -0.013 | -0.042 |
| hypoxia_3wks | -0.052 | -1.113 |
| hypoxia_6wks | 0.38 | 0.115 |
| glycerol | -1.513 | -0.53 |
| cholesterol | -0.494 | -0.807 |
| AJ | 0.385 | 0.072 |
| Bibs02 | 0.607 | 0.209 |
| Bibs02c | -0.058 | 0.117 |
| BL6 | -0.252 | -0.318 |
| BL6a | -0.122 | -0.178 |
| BXD01 | -0.004 | -0.435 |
| BXD010 | 0.156 | 0.121 |
| BXD011 | -0.238 | 0.109 |
| BXD03 | 0.282 | -0.5 |
| BXD04 | -0.041 | -0.514 |
| BXD05 | 0.399 | -0.658 |
| BXD06 | -0.104 | -0.417 |
| BXD07 | -0.108 | -1.043 |
| BXD08 | -0.057 | -0.713 |
| BXD09 | -0.228 | -0.439 |
| CAST | 0.377 | 0.482 |
| CCcont | -0.42 | -0.46 |
| DS01 | 0.715 | 0.684 |
| DS02 | 0.991 | 0.315 |
| DS04 | -0.006 | 0.055 |
| DS0c | 1.009 | -0.091 |
| GP01 | 0.088 | 0.21 |
| GP02 | 0.005 | 0.709 |
| GP0c | -0.423 | 0.091 |
| NOD | 0.519 | 0.656 |
| NZO | 0.105 | -0.185 |
| PWK | 0.823 | 0.162 |
| H37Rv_KO_CtpC | 0.172 | 0.285 |
| H37Rv_KO_CtpD | -0.326 | 0.265 |
| H37Rv_KO_Rv1272 | 0.688 | 0.022 |
| H37Rv_KO_SugABC | 0.245 | 0.389 |
| H37Rv_KO_MbtN | 0.158 | 0.271 |
| Trans05 | 0.698 | 0.301 |
| macrophage_unactivated | 0.234 | -1.24 |
| IL1 | -0.955 | -1.531 |
| Rapamycin | -0.147 | -1.344 |
| Tcell | -0.094 | -1.329 |
| GMCSF | -0.285 | -1.65 |
| IFNab | -0.311 | -1.013 |
| IFNg | -0.543 | -1.358 |
| IFNg_GMCSF1 | -0.182 | -0.566 |
| Rv1432_day32 | 0.521 | 0.541 |
| Rv1565c_day32 | -0.262 | -1.061 |
| secA2_input | -0.26 | 0.512 |
| delta_Rv3594 | 0.477 | 0.061 |
| delta_Rv3717 | 0.437 | -0.146 |
| delta_Rv3811 | 0.202 | 0.03 |
| delta_Rv0954 | 0.863 | 0.193 |
| PonA1 | 0.212 | -0.314 |
| EccD1_KO | 0.26 | 0.434 |
| EspI_KO | 0.06 | 1.483 |
| PE35_KO | -0.257 | 0.298 |
| PPE68_KO | -0.013 | 0.035 |
| glycerol2 | 0.685 | 0.551 |
| lignocerate | 0.85 | 0.491 |
| oleate | 1.187 | 0.346 |
| phosphatidylcholine | 1.181 | 0.728 |
| acetate | 0.407 | -0.204 |
| glucAc | -0.012 | 0.637 |
| Rv0950ko | -0.093 | 0.47 |
| Rv1096ko | -0.386 | -0.106 |
| Rv3684ko | -0.488 | 0.029 |
| delta_otsA_trehalose | -0.109 | -0.588 |