Top 10 genes with highest correlation to Rv2142c/parE2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2958c/- | (cc=0.63) | info on Rv2958c/- |
| Rv1814/erg3 | (cc=0.6115) | info on Rv1814/erg3 |
| Rv1523/- | (cc=0.5781) | info on Rv1523/- |
| Rv2550c/vapB20 | (cc=0.543) | info on Rv2550c/vapB20 |
| Rv0755A/- | (cc=0.5426) | info on Rv0755A/- |
| Rv1071c/echA9 | (cc=0.5367) | info on Rv1071c/echA9 |
| Rv3065/mmr | (cc=0.5107) | info on Rv3065/mmr |
| Rv3691/- | (cc=0.501) | info on Rv3691/- |
| Rv2768c/PPE43 | (cc=0.498) | info on Rv2768c/PPE43 |
| Rv0346c/ansP2 | (cc=0.4873) | info on Rv0346c/ansP2 |
Correlation of Rv2142c/parE2 with Rv2550c/vapB20
Normalized LFCs for Rv2142c/parE2:
(description and provenance of datasets)
| Rv2142c/parE2 | Rv2550c/vapB20 | |
| Fe_supp_jason_reseq | -1.225 | -1.414 |
| low_pH_jason_reseq | -0.974 | -0.612 |
| NO_jason_reseq | -0.543 | -0.546 |
| B6_jason_reseq | -0.423 | 0.49 |
| MHCII_jason_reseq | 0.684 | -0.47 |
| Isoniazid02 | 0.112 | 1.2 |
| Rifampicin4 | 0.133 | -0.114 |
| Ethambutol3 | 1.125 | 0.626 |
| Meropenem3 | 0.327 | 0.509 |
| Vancomycin16 | -0.263 | -0.111 |
| Rv2680_day32 | 0.358 | -1.029 |
| H37Rv_KO_MarP | -0.013 | -1.116 |
| hypoxia_3wks | -0.052 | 0.0 |
| hypoxia_6wks | 0.38 | 0.614 |
| glycerol | -1.513 | -2.956 |
| cholesterol | -0.494 | -1.071 |
| AJ | 0.385 | 0.266 |
| Bibs02 | 0.607 | -0.268 |
| Bibs02c | -0.058 | 0.0 |
| BL6 | -0.252 | -1.436 |
| BL6a | -0.122 | -0.667 |
| BXD01 | -0.004 | -1.619 |
| BXD010 | 0.156 | -0.947 |
| BXD011 | -0.238 | -1.109 |
| BXD03 | 0.282 | -0.513 |
| BXD04 | -0.041 | -0.915 |
| BXD05 | 0.399 | -1.97 |
| BXD06 | -0.104 | -1.21 |
| BXD07 | -0.108 | -0.619 |
| BXD08 | -0.057 | -0.905 |
| BXD09 | -0.228 | -0.564 |
| CAST | 0.377 | -0.727 |
| CCcont | -0.42 | -0.326 |
| DS01 | 0.715 | 2.091 |
| DS02 | 0.991 | 1.542 |
| DS04 | -0.006 | 1.449 |
| DS0c | 1.009 | 1.197 |
| GP01 | 0.088 | -1.508 |
| GP02 | 0.005 | -1.597 |
| GP0c | -0.423 | -1.132 |
| NOD | 0.519 | -0.29 |
| NZO | 0.105 | -0.8 |
| PWK | 0.823 | -0.58 |
| H37Rv_KO_CtpC | 0.172 | 0.164 |
| H37Rv_KO_CtpD | -0.326 | -1.575 |
| H37Rv_KO_Rv1272 | 0.688 | -1.087 |
| H37Rv_KO_SugABC | 0.245 | -0.111 |
| H37Rv_KO_MbtN | 0.158 | -0.048 |
| Trans05 | 0.698 | 0.625 |
| macrophage_unactivated | 0.234 | -1.36 |
| IL1 | -0.955 | -2.572 |
| Rapamycin | -0.147 | -2.167 |
| Tcell | -0.094 | 0.15 |
| GMCSF | -0.285 | 0.462 |
| IFNab | -0.311 | 1.001 |
| IFNg | -0.543 | -1.323 |
| IFNg_GMCSF1 | -0.182 | -1.766 |
| Rv1432_day32 | 0.521 | -0.533 |
| Rv1565c_day32 | -0.262 | 0.305 |
| secA2_input | -0.26 | 0.435 |
| delta_Rv3594 | 0.477 | 1.415 |
| delta_Rv3717 | 0.437 | 0.245 |
| delta_Rv3811 | 0.202 | 1.425 |
| delta_Rv0954 | 0.863 | 0.516 |
| PonA1 | 0.212 | -0.377 |
| EccD1_KO | 0.26 | 0.168 |
| EspI_KO | 0.06 | -1.383 |
| PE35_KO | -0.257 | -0.05 |
| PPE68_KO | -0.013 | 0.109 |
| glycerol2 | 0.685 | 2.802 |
| lignocerate | 0.85 | 2.792 |
| oleate | 1.187 | 0.829 |
| phosphatidylcholine | 1.181 | 2.697 |
| acetate | 0.407 | 3.263 |
| glucAc | -0.012 | 2.21 |
| Rv0950ko | -0.093 | 0.238 |
| Rv1096ko | -0.386 | -0.863 |
| Rv3684ko | -0.488 | -0.331 |
| delta_otsA_trehalose | -0.109 | -0.353 |