Top 10 genes with highest correlation to Rv2124c/metH:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3484/cpsA | (cc=0.4951) | info on Rv3484/cpsA |
| Rv2473/- | (cc=0.4925) | info on Rv2473/- |
| Rv0101/nrp | (cc=0.459) | info on Rv0101/nrp |
| Rv3395A/- | (cc=0.4566) | info on Rv3395A/- |
| Rv3869/eccB1 | (cc=0.4498) | info on Rv3869/eccB1 |
| Rv3881c/espB | (cc=0.4448) | info on Rv3881c/espB |
| Rv3883c/mycP1 | (cc=0.4443) | info on Rv3883c/mycP1 |
| Rv1663/pks17 | (cc=0.4418) | info on Rv1663/pks17 |
| Rv3491/- | (cc=0.44) | info on Rv3491/- |
| Rv1965/yrbE3B | (cc=0.4397) | info on Rv1965/yrbE3B |
Correlation of Rv2124c/metH with Rv2473/-
Normalized LFCs for Rv2124c/metH:
(description and provenance of datasets)
| Rv2124c/metH | Rv2473/- | |
| Fe_supp_jason_reseq | -0.156 | 0.027 |
| low_pH_jason_reseq | -0.018 | 0.908 |
| NO_jason_reseq | -0.113 | -0.095 |
| B6_jason_reseq | 0.535 | -0.265 |
| MHCII_jason_reseq | -1.726 | -0.576 |
| Isoniazid02 | 0.512 | 0.291 |
| Rifampicin4 | 0.2 | 0.398 |
| Ethambutol3 | 1.226 | 1.366 |
| Meropenem3 | 1.572 | 2.304 |
| Vancomycin16 | -0.069 | 0.0 |
| Rv2680_day32 | 0.304 | -0.084 |
| H37Rv_KO_MarP | -0.169 | 0.099 |
| hypoxia_3wks | 0.518 | 0.287 |
| hypoxia_6wks | 1.28 | 1.071 |
| glycerol | -0.856 | -0.721 |
| cholesterol | -0.067 | -0.84 |
| AJ | -0.59 | -0.514 |
| Bibs02 | -0.846 | 0.502 |
| Bibs02c | -0.335 | 0.432 |
| BL6 | 0.469 | 0.014 |
| BL6a | -0.145 | -0.189 |
| BXD01 | -0.209 | -0.253 |
| BXD010 | -0.659 | -0.822 |
| BXD011 | -0.204 | -0.137 |
| BXD03 | -0.119 | -0.461 |
| BXD04 | 0.039 | -1.037 |
| BXD05 | -0.185 | -0.18 |
| BXD06 | -0.687 | -0.775 |
| BXD07 | -0.968 | -0.71 |
| BXD08 | -0.603 | -0.333 |
| BXD09 | -0.465 | -0.525 |
| CAST | -0.25 | -0.644 |
| CCcont | -0.507 | -0.153 |
| DS01 | 0.044 | 0.014 |
| DS02 | 0.214 | 0.132 |
| DS04 | 0.573 | 0.455 |
| DS0c | -0.464 | -0.025 |
| GP01 | -0.702 | 0.122 |
| GP02 | -0.53 | -0.579 |
| GP0c | -0.237 | -0.742 |
| NOD | -1.46 | -0.242 |
| NZO | -1.578 | -0.529 |
| PWK | -0.405 | -0.011 |
| H37Rv_KO_CtpC | -0.467 | 0.142 |
| H37Rv_KO_CtpD | -0.302 | -0.106 |
| H37Rv_KO_Rv1272 | -0.479 | -0.61 |
| H37Rv_KO_SugABC | 0.074 | 0.128 |
| H37Rv_KO_MbtN | -0.083 | 0.305 |
| Trans05 | -0.579 | 0.387 |
| macrophage_unactivated | -0.54 | 0.0 |
| IL1 | -0.869 | -0.552 |
| Rapamycin | -0.73 | 0.095 |
| Tcell | -0.557 | 0.629 |
| GMCSF | -0.385 | 0.124 |
| IFNab | -0.363 | 0.499 |
| IFNg | 0.409 | -0.219 |
| IFNg_GMCSF1 | -0.622 | 1.062 |
| Rv1432_day32 | 0.0 | 0.055 |
| Rv1565c_day32 | -1.602 | 0.532 |
| secA2_input | -0.632 | -0.25 |
| delta_Rv3594 | -0.015 | 0.437 |
| delta_Rv3717 | -0.248 | 0.347 |
| delta_Rv3811 | -0.241 | 0.198 |
| delta_Rv0954 | -0.27 | 0.301 |
| PonA1 | -0.201 | 0.029 |
| EccD1_KO | 0.161 | 0.345 |
| EspI_KO | 0.174 | -0.291 |
| PE35_KO | -0.073 | -1.339 |
| PPE68_KO | 0.157 | -0.637 |
| glycerol2 | 0.488 | 0.611 |
| lignocerate | 0.373 | 1.136 |
| oleate | 0.326 | -0.577 |
| phosphatidylcholine | 0.338 | 0.717 |
| acetate | -0.043 | 0.62 |
| glucAc | 0.249 | 0.996 |
| Rv0950ko | 0.039 | -0.555 |
| Rv1096ko | 0.235 | -0.389 |
| Rv3684ko | 0.727 | 0.236 |
| delta_otsA_trehalose | 1.184 | 1.798 |