Top 10 genes with highest correlation to Rv2124c/metH:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3484/cpsA | (cc=0.4951) | info on Rv3484/cpsA |
| Rv2473/- | (cc=0.4925) | info on Rv2473/- |
| Rv0101/nrp | (cc=0.459) | info on Rv0101/nrp |
| Rv3395A/- | (cc=0.4566) | info on Rv3395A/- |
| Rv3869/eccB1 | (cc=0.4498) | info on Rv3869/eccB1 |
| Rv3881c/espB | (cc=0.4448) | info on Rv3881c/espB |
| Rv3883c/mycP1 | (cc=0.4443) | info on Rv3883c/mycP1 |
| Rv1663/pks17 | (cc=0.4418) | info on Rv1663/pks17 |
| Rv3491/- | (cc=0.44) | info on Rv3491/- |
| Rv1965/yrbE3B | (cc=0.4397) | info on Rv1965/yrbE3B |
Correlation of Rv2124c/metH with Rv1965/yrbE3B
Normalized LFCs for Rv2124c/metH:
(description and provenance of datasets)
| Rv2124c/metH | Rv1965/yrbE3B | |
| Fe_supp_jason_reseq | -0.156 | -0.562 |
| low_pH_jason_reseq | -0.018 | -0.811 |
| NO_jason_reseq | -0.113 | 0.032 |
| B6_jason_reseq | 0.535 | -0.263 |
| MHCII_jason_reseq | -1.726 | 0.235 |
| Isoniazid02 | 0.512 | 2.097 |
| Rifampicin4 | 0.2 | -0.108 |
| Ethambutol3 | 1.226 | 1.24 |
| Meropenem3 | 1.572 | 2.064 |
| Vancomycin16 | -0.069 | 0.064 |
| Rv2680_day32 | 0.304 | -0.068 |
| H37Rv_KO_MarP | -0.169 | -0.452 |
| hypoxia_3wks | 0.518 | 0.223 |
| hypoxia_6wks | 1.28 | -0.712 |
| glycerol | -0.856 | -0.29 |
| cholesterol | -0.067 | -0.2 |
| AJ | -0.59 | -0.076 |
| Bibs02 | -0.846 | -0.834 |
| Bibs02c | -0.335 | 0.483 |
| BL6 | 0.469 | 0.81 |
| BL6a | -0.145 | 0.046 |
| BXD01 | -0.209 | -0.444 |
| BXD010 | -0.659 | -0.531 |
| BXD011 | -0.204 | -0.9 |
| BXD03 | -0.119 | -0.637 |
| BXD04 | 0.039 | -0.647 |
| BXD05 | -0.185 | -1.327 |
| BXD06 | -0.687 | -0.907 |
| BXD07 | -0.968 | -0.481 |
| BXD08 | -0.603 | -1.093 |
| BXD09 | -0.465 | -0.869 |
| CAST | -0.25 | -0.33 |
| CCcont | -0.507 | -0.816 |
| DS01 | 0.044 | -0.339 |
| DS02 | 0.214 | -0.383 |
| DS04 | 0.573 | -0.461 |
| DS0c | -0.464 | -0.429 |
| GP01 | -0.702 | -0.781 |
| GP02 | -0.53 | -1.295 |
| GP0c | -0.237 | 0.277 |
| NOD | -1.46 | -0.56 |
| NZO | -1.578 | -0.497 |
| PWK | -0.405 | -0.345 |
| H37Rv_KO_CtpC | -0.467 | -0.061 |
| H37Rv_KO_CtpD | -0.302 | 1.129 |
| H37Rv_KO_Rv1272 | -0.479 | 1.262 |
| H37Rv_KO_SugABC | 0.074 | -1.037 |
| H37Rv_KO_MbtN | -0.083 | -0.049 |
| Trans05 | -0.579 | 0.105 |
| macrophage_unactivated | -0.54 | -0.628 |
| IL1 | -0.869 | -0.383 |
| Rapamycin | -0.73 | -0.644 |
| Tcell | -0.557 | -0.805 |
| GMCSF | -0.385 | -1.133 |
| IFNab | -0.363 | -0.895 |
| IFNg | 0.409 | 0.0 |
| IFNg_GMCSF1 | -0.622 | -0.892 |
| Rv1432_day32 | 0.0 | 2.082 |
| Rv1565c_day32 | -1.602 | -0.177 |
| secA2_input | -0.632 | 0.556 |
| delta_Rv3594 | -0.015 | 0.0 |
| delta_Rv3717 | -0.248 | -0.297 |
| delta_Rv3811 | -0.241 | 0.054 |
| delta_Rv0954 | -0.27 | -0.239 |
| PonA1 | -0.201 | 0.121 |
| EccD1_KO | 0.161 | 1.352 |
| EspI_KO | 0.174 | 0.933 |
| PE35_KO | -0.073 | 0.545 |
| PPE68_KO | 0.157 | 0.506 |
| glycerol2 | 0.488 | 0.642 |
| lignocerate | 0.373 | 0.37 |
| oleate | 0.326 | 0.7 |
| phosphatidylcholine | 0.338 | 0.563 |
| acetate | -0.043 | 0.02 |
| glucAc | 0.249 | 0.124 |
| Rv0950ko | 0.039 | 1.224 |
| Rv1096ko | 0.235 | 1.158 |
| Rv3684ko | 0.727 | 0.18 |
| delta_otsA_trehalose | 1.184 | 0.603 |