Top 10 genes with highest correlation to Rv2116/lppK:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1173/fbiC | (cc=0.506) | info on Rv1173/fbiC |
| Rv0630c/recB | (cc=0.4978) | info on Rv0630c/recB |
| Rv1363c/- | (cc=0.4687) | info on Rv1363c/- |
| Rv0631c/recC | (cc=0.4606) | info on Rv0631c/recC |
| Rv3561/fadD3 | (cc=0.4558) | info on Rv3561/fadD3 |
| Rv1881c/lppE | (cc=0.4552) | info on Rv1881c/lppE |
| Rv2563/- | (cc=0.4478) | info on Rv2563/- |
| Rv3700c/- | (cc=0.4376) | info on Rv3700c/- |
| Rv0125/pepA | (cc=0.4363) | info on Rv0125/pepA |
| Rv3728/- | (cc=0.4295) | info on Rv3728/- |
Correlation of Rv2116/lppK with Rv3728/-
Normalized LFCs for Rv2116/lppK:
(description and provenance of datasets)
| Rv2116/lppK | Rv3728/- | |
| Fe_supp_jason_reseq | -0.131 | 0.68 |
| low_pH_jason_reseq | -1.342 | -0.478 |
| NO_jason_reseq | -1.213 | -0.572 |
| B6_jason_reseq | -1.825 | 0.13 |
| MHCII_jason_reseq | -0.461 | 0.462 |
| Isoniazid02 | -0.159 | -0.061 |
| Rifampicin4 | 1.641 | 0.382 |
| Ethambutol3 | 1.351 | 1.589 |
| Meropenem3 | 0.726 | 0.133 |
| Vancomycin16 | 0.708 | 0.042 |
| Rv2680_day32 | -0.264 | -0.102 |
| H37Rv_KO_MarP | -0.951 | 0.083 |
| hypoxia_3wks | -0.431 | -0.1 |
| hypoxia_6wks | -1.004 | -0.351 |
| glycerol | -0.952 | 0.01 |
| cholesterol | -0.638 | -0.09 |
| AJ | -0.686 | 0.114 |
| Bibs02 | 0.491 | 0.142 |
| Bibs02c | 0.1 | 0.052 |
| BL6 | -0.752 | -0.071 |
| BL6a | -0.776 | -0.466 |
| BXD01 | -0.987 | -0.52 |
| BXD010 | -0.215 | -0.157 |
| BXD011 | -1.468 | -1.145 |
| BXD03 | -1.131 | -0.362 |
| BXD04 | -1.215 | -0.11 |
| BXD05 | -1.176 | -0.369 |
| BXD06 | -0.862 | -1.036 |
| BXD07 | -0.802 | -0.702 |
| BXD08 | -1.137 | -0.155 |
| BXD09 | -0.602 | -0.821 |
| CAST | -1.255 | 0.113 |
| CCcont | -0.378 | -0.077 |
| DS01 | 0.869 | 0.139 |
| DS02 | 1.271 | 0.699 |
| DS04 | 1.112 | 0.521 |
| DS0c | 1.006 | 0.591 |
| GP01 | -0.586 | 0.202 |
| GP02 | -1.205 | -0.186 |
| GP0c | -0.356 | 0.395 |
| NOD | -0.241 | -0.011 |
| NZO | -0.678 | -0.134 |
| PWK | -0.368 | -0.175 |
| H37Rv_KO_CtpC | -0.715 | -0.084 |
| H37Rv_KO_CtpD | 0.372 | 0.421 |
| H37Rv_KO_Rv1272 | -1.557 | -0.369 |
| H37Rv_KO_SugABC | -0.176 | 0.456 |
| H37Rv_KO_MbtN | 0.385 | 0.154 |
| Trans05 | -0.251 | 0.463 |
| macrophage_unactivated | 0.461 | 0.186 |
| IL1 | 0.389 | -0.208 |
| Rapamycin | 0.81 | -0.16 |
| Tcell | -0.785 | -0.345 |
| GMCSF | 0.219 | -0.209 |
| IFNab | 0.989 | -0.051 |
| IFNg | 0.802 | -0.358 |
| IFNg_GMCSF1 | 1.276 | 0.107 |
| Rv1432_day32 | -1.241 | 0.207 |
| Rv1565c_day32 | 0.894 | 0.199 |
| secA2_input | -0.507 | 0.656 |
| delta_Rv3594 | -1.277 | -0.266 |
| delta_Rv3717 | -1.528 | -0.364 |
| delta_Rv3811 | -0.515 | -0.294 |
| delta_Rv0954 | 0.158 | 0.032 |
| PonA1 | -0.587 | -0.215 |
| EccD1_KO | -0.405 | -0.161 |
| EspI_KO | -0.55 | -0.436 |
| PE35_KO | 0.158 | 0.085 |
| PPE68_KO | 0.147 | -0.336 |
| glycerol2 | -0.78 | 0.135 |
| lignocerate | -2.303 | 0.257 |
| oleate | -0.55 | 0.275 |
| phosphatidylcholine | -1.447 | 0.259 |
| acetate | -1.288 | 0.16 |
| glucAc | -1.573 | -0.031 |
| Rv0950ko | -0.543 | 0.096 |
| Rv1096ko | -0.896 | -0.133 |
| Rv3684ko | -0.645 | -0.432 |
| delta_otsA_trehalose | -1.533 | 0.184 |