Top 10 genes with highest correlation to Rv2116/lppK:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1173/fbiC | (cc=0.506) | info on Rv1173/fbiC |
| Rv0630c/recB | (cc=0.4978) | info on Rv0630c/recB |
| Rv1363c/- | (cc=0.4687) | info on Rv1363c/- |
| Rv0631c/recC | (cc=0.4606) | info on Rv0631c/recC |
| Rv3561/fadD3 | (cc=0.4558) | info on Rv3561/fadD3 |
| Rv1881c/lppE | (cc=0.4552) | info on Rv1881c/lppE |
| Rv2563/- | (cc=0.4478) | info on Rv2563/- |
| Rv3700c/- | (cc=0.4376) | info on Rv3700c/- |
| Rv0125/pepA | (cc=0.4363) | info on Rv0125/pepA |
| Rv3728/- | (cc=0.4295) | info on Rv3728/- |
Correlation of Rv2116/lppK with Rv2563/-
Normalized LFCs for Rv2116/lppK:
(description and provenance of datasets)
| Rv2116/lppK | Rv2563/- | |
| Fe_supp_jason_reseq | -0.131 | 1.514 |
| low_pH_jason_reseq | -1.342 | 0.0 |
| NO_jason_reseq | -1.213 | -4.161 |
| B6_jason_reseq | -1.825 | -2.7 |
| MHCII_jason_reseq | -0.461 | -2.378 |
| Isoniazid02 | -0.159 | 0.677 |
| Rifampicin4 | 1.641 | -1.868 |
| Ethambutol3 | 1.351 | 2.152 |
| Meropenem3 | 0.726 | -1.269 |
| Vancomycin16 | 0.708 | -0.488 |
| Rv2680_day32 | -0.264 | -1.894 |
| H37Rv_KO_MarP | -0.951 | 0.364 |
| hypoxia_3wks | -0.431 | -2.939 |
| hypoxia_6wks | -1.004 | -3.627 |
| glycerol | -0.952 | 1.156 |
| cholesterol | -0.638 | 0.46 |
| AJ | -0.686 | -4.323 |
| Bibs02 | 0.491 | -0.13 |
| Bibs02c | 0.1 | -0.149 |
| BL6 | -0.752 | -2.974 |
| BL6a | -0.776 | -1.34 |
| BXD01 | -0.987 | -3.227 |
| BXD010 | -0.215 | -3.045 |
| BXD011 | -1.468 | -2.167 |
| BXD03 | -1.131 | -2.443 |
| BXD04 | -1.215 | -2.94 |
| BXD05 | -1.176 | -3.2 |
| BXD06 | -0.862 | -3.307 |
| BXD07 | -0.802 | -3.167 |
| BXD08 | -1.137 | -3.162 |
| BXD09 | -0.602 | -3.341 |
| CAST | -1.255 | -2.194 |
| CCcont | -0.378 | -0.754 |
| DS01 | 0.869 | 1.932 |
| DS02 | 1.271 | 1.281 |
| DS04 | 1.112 | 1.206 |
| DS0c | 1.006 | 1.634 |
| GP01 | -0.586 | -2.446 |
| GP02 | -1.205 | -2.061 |
| GP0c | -0.356 | -3.221 |
| NOD | -0.241 | -0.898 |
| NZO | -0.678 | -3.835 |
| PWK | -0.368 | 0.665 |
| H37Rv_KO_CtpC | -0.715 | -1.997 |
| H37Rv_KO_CtpD | 0.372 | -1.089 |
| H37Rv_KO_Rv1272 | -1.557 | -1.451 |
| H37Rv_KO_SugABC | -0.176 | -1.736 |
| H37Rv_KO_MbtN | 0.385 | -2.191 |
| Trans05 | -0.251 | -2.988 |
| macrophage_unactivated | 0.461 | 1.411 |
| IL1 | 0.389 | -1.64 |
| Rapamycin | 0.81 | -0.651 |
| Tcell | -0.785 | -1.212 |
| GMCSF | 0.219 | -1.212 |
| IFNab | 0.989 | 0.729 |
| IFNg | 0.802 | -2.028 |
| IFNg_GMCSF1 | 1.276 | -0.434 |
| Rv1432_day32 | -1.241 | -0.884 |
| Rv1565c_day32 | 0.894 | 2.504 |
| secA2_input | -0.507 | 0.127 |
| delta_Rv3594 | -1.277 | -2.496 |
| delta_Rv3717 | -1.528 | -2.054 |
| delta_Rv3811 | -0.515 | -2.427 |
| delta_Rv0954 | 0.158 | 2.344 |
| PonA1 | -0.587 | 2.92 |
| EccD1_KO | -0.405 | -0.743 |
| EspI_KO | -0.55 | 1.395 |
| PE35_KO | 0.158 | 2.013 |
| PPE68_KO | 0.147 | 1.67 |
| glycerol2 | -0.78 | -3.095 |
| lignocerate | -2.303 | -1.315 |
| oleate | -0.55 | -3.265 |
| phosphatidylcholine | -1.447 | -1.693 |
| acetate | -1.288 | -0.893 |
| glucAc | -1.573 | -0.881 |
| Rv0950ko | -0.543 | 0.841 |
| Rv1096ko | -0.896 | 1.013 |
| Rv3684ko | -0.645 | -0.079 |
| delta_otsA_trehalose | -1.533 | -1.192 |