Top 10 genes with highest correlation to Rv2116/lppK:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1173/fbiC | (cc=0.506) | info on Rv1173/fbiC |
| Rv0630c/recB | (cc=0.4978) | info on Rv0630c/recB |
| Rv1363c/- | (cc=0.4687) | info on Rv1363c/- |
| Rv0631c/recC | (cc=0.4606) | info on Rv0631c/recC |
| Rv3561/fadD3 | (cc=0.4558) | info on Rv3561/fadD3 |
| Rv1881c/lppE | (cc=0.4552) | info on Rv1881c/lppE |
| Rv2563/- | (cc=0.4478) | info on Rv2563/- |
| Rv3700c/- | (cc=0.4376) | info on Rv3700c/- |
| Rv0125/pepA | (cc=0.4363) | info on Rv0125/pepA |
| Rv3728/- | (cc=0.4295) | info on Rv3728/- |
Correlation of Rv2116/lppK with Rv3561/fadD3
Normalized LFCs for Rv2116/lppK:
(description and provenance of datasets)
| Rv2116/lppK | Rv3561/fadD3 | |
| Fe_supp_jason_reseq | -0.131 | 1.129 |
| low_pH_jason_reseq | -1.342 | 0.967 |
| NO_jason_reseq | -1.213 | 0.575 |
| B6_jason_reseq | -1.825 | 0.264 |
| MHCII_jason_reseq | -0.461 | 0.319 |
| Isoniazid02 | -0.159 | 1.857 |
| Rifampicin4 | 1.641 | 1.419 |
| Ethambutol3 | 1.351 | 1.552 |
| Meropenem3 | 0.726 | 1.807 |
| Vancomycin16 | 0.708 | 0.806 |
| Rv2680_day32 | -0.264 | -1.492 |
| H37Rv_KO_MarP | -0.951 | -0.178 |
| hypoxia_3wks | -0.431 | 0.0 |
| hypoxia_6wks | -1.004 | -0.292 |
| glycerol | -0.952 | 1.109 |
| cholesterol | -0.638 | -2.394 |
| AJ | -0.686 | -0.116 |
| Bibs02 | 0.491 | 0.804 |
| Bibs02c | 0.1 | -0.192 |
| BL6 | -0.752 | 0.476 |
| BL6a | -0.776 | -0.29 |
| BXD01 | -0.987 | -0.811 |
| BXD010 | -0.215 | -0.406 |
| BXD011 | -1.468 | -1.277 |
| BXD03 | -1.131 | -0.276 |
| BXD04 | -1.215 | -0.958 |
| BXD05 | -1.176 | -0.228 |
| BXD06 | -0.862 | -0.653 |
| BXD07 | -0.802 | -0.027 |
| BXD08 | -1.137 | -0.094 |
| BXD09 | -0.602 | -0.409 |
| CAST | -1.255 | -1.647 |
| CCcont | -0.378 | -0.186 |
| DS01 | 0.869 | 0.962 |
| DS02 | 1.271 | 1.092 |
| DS04 | 1.112 | 0.725 |
| DS0c | 1.006 | 0.493 |
| GP01 | -0.586 | 1.576 |
| GP02 | -1.205 | 0.759 |
| GP0c | -0.356 | 0.316 |
| NOD | -0.241 | -1.883 |
| NZO | -0.678 | -0.361 |
| PWK | -0.368 | 0.566 |
| H37Rv_KO_CtpC | -0.715 | 0.093 |
| H37Rv_KO_CtpD | 0.372 | 0.439 |
| H37Rv_KO_Rv1272 | -1.557 | -0.929 |
| H37Rv_KO_SugABC | -0.176 | -0.532 |
| H37Rv_KO_MbtN | 0.385 | -0.757 |
| Trans05 | -0.251 | 0.347 |
| macrophage_unactivated | 0.461 | 0.079 |
| IL1 | 0.389 | 0.486 |
| Rapamycin | 0.81 | 0.957 |
| Tcell | -0.785 | -0.039 |
| GMCSF | 0.219 | 0.462 |
| IFNab | 0.989 | 0.327 |
| IFNg | 0.802 | -0.206 |
| IFNg_GMCSF1 | 1.276 | 1.194 |
| Rv1432_day32 | -1.241 | 0.0 |
| Rv1565c_day32 | 0.894 | 0.36 |
| secA2_input | -0.507 | -0.297 |
| delta_Rv3594 | -1.277 | -0.43 |
| delta_Rv3717 | -1.528 | 0.196 |
| delta_Rv3811 | -0.515 | -1.025 |
| delta_Rv0954 | 0.158 | -0.513 |
| PonA1 | -0.587 | 0.724 |
| EccD1_KO | -0.405 | -0.779 |
| EspI_KO | -0.55 | -0.724 |
| PE35_KO | 0.158 | -0.642 |
| PPE68_KO | 0.147 | -0.24 |
| glycerol2 | -0.78 | -0.502 |
| lignocerate | -2.303 | -0.732 |
| oleate | -0.55 | -0.23 |
| phosphatidylcholine | -1.447 | -0.35 |
| acetate | -1.288 | -0.618 |
| glucAc | -1.573 | -1.011 |
| Rv0950ko | -0.543 | 0.0 |
| Rv1096ko | -0.896 | 0.784 |
| Rv3684ko | -0.645 | 0.55 |
| delta_otsA_trehalose | -1.533 | -0.459 |