Top 10 genes with highest correlation to Rv2089c/pepE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0889c/citA | (cc=0.6204) | info on Rv0889c/citA |
| Rv2629/- | (cc=0.5831) | info on Rv2629/- |
| Rv0203/- | (cc=0.5615) | info on Rv0203/- |
| Rv1632c/- | (cc=0.5542) | info on Rv1632c/- |
| Rv1251c/- | (cc=0.5464) | info on Rv1251c/- |
| Rv1279/- | (cc=0.5395) | info on Rv1279/- |
| Rv1182/papA3 | (cc=0.5362) | info on Rv1182/papA3 |
| Rv3078/hab | (cc=0.5354) | info on Rv3078/hab |
| Rv1681/moeX | (cc=0.5308) | info on Rv1681/moeX |
| Rv2725c/hflX | (cc=0.5288) | info on Rv2725c/hflX |
Correlation of Rv2089c/pepE with Rv2629/-
Normalized LFCs for Rv2089c/pepE:
(description and provenance of datasets)
| Rv2089c/pepE | Rv2629/- | |
| Fe_supp_jason_reseq | 0.813 | -0.592 |
| low_pH_jason_reseq | -0.179 | -0.293 |
| NO_jason_reseq | 0.622 | 0.197 |
| B6_jason_reseq | 0.61 | 0.216 |
| MHCII_jason_reseq | 0.0 | 0.084 |
| Isoniazid02 | 0.973 | 1.983 |
| Rifampicin4 | 0.0 | 0.352 |
| Ethambutol3 | 3.413 | 1.577 |
| Meropenem3 | 2.671 | 2.259 |
| Vancomycin16 | 0.796 | 0.369 |
| Rv2680_day32 | -0.471 | -0.544 |
| H37Rv_KO_MarP | -0.785 | 0.141 |
| hypoxia_3wks | 0.136 | -0.279 |
| hypoxia_6wks | 0.702 | -0.766 |
| glycerol | -0.089 | -0.531 |
| cholesterol | 0.627 | -0.636 |
| AJ | 0.131 | -0.326 |
| Bibs02 | 0.51 | -0.184 |
| Bibs02c | 0.784 | -0.496 |
| BL6 | 0.589 | -0.681 |
| BL6a | -0.181 | -0.694 |
| BXD01 | -1.104 | -0.937 |
| BXD010 | -0.435 | -1.1 |
| BXD011 | -1.578 | -0.412 |
| BXD03 | -1.883 | -0.206 |
| BXD04 | -1.268 | -1.245 |
| BXD05 | -0.758 | -0.521 |
| BXD06 | -1.269 | -0.566 |
| BXD07 | -0.338 | -0.597 |
| BXD08 | -1.042 | -0.476 |
| BXD09 | -0.863 | -0.863 |
| CAST | 0.162 | -0.561 |
| CCcont | -0.997 | -1.183 |
| DS01 | 0.409 | -0.636 |
| DS02 | -0.065 | -0.343 |
| DS04 | -0.438 | -0.639 |
| DS0c | 0.506 | 0.075 |
| GP01 | -0.44 | -0.529 |
| GP02 | -1.364 | -0.224 |
| GP0c | -1.19 | -1.292 |
| NOD | 0.576 | 0.901 |
| NZO | 0.37 | -0.699 |
| PWK | 0.388 | -0.31 |
| H37Rv_KO_CtpC | -1.486 | -1.12 |
| H37Rv_KO_CtpD | 0.435 | -0.317 |
| H37Rv_KO_Rv1272 | -0.76 | -0.892 |
| H37Rv_KO_SugABC | 0.588 | 0.47 |
| H37Rv_KO_MbtN | -1.38 | -0.85 |
| Trans05 | -0.183 | -0.214 |
| macrophage_unactivated | -0.641 | -0.139 |
| IL1 | -0.217 | 0.249 |
| Rapamycin | -1.249 | -0.755 |
| Tcell | -1.03 | -0.44 |
| GMCSF | 0.0 | 0.354 |
| IFNab | -0.296 | -0.481 |
| IFNg | -0.262 | 0.112 |
| IFNg_GMCSF1 | -0.553 | 0.066 |
| Rv1432_day32 | -0.24 | 0.202 |
| Rv1565c_day32 | 0.496 | 0.137 |
| secA2_input | 1.188 | -0.966 |
| delta_Rv3594 | 1.634 | 0.467 |
| delta_Rv3717 | 0.594 | 0.712 |
| delta_Rv3811 | 1.866 | 0.143 |
| delta_Rv0954 | 0.0 | -0.624 |
| PonA1 | 0.728 | -0.512 |
| EccD1_KO | 0.51 | 0.053 |
| EspI_KO | 1.343 | 0.742 |
| PE35_KO | 0.621 | 0.563 |
| PPE68_KO | 1.731 | 0.528 |
| glycerol2 | -1.131 | -0.234 |
| lignocerate | -1.047 | -0.142 |
| oleate | -0.872 | 0.743 |
| phosphatidylcholine | -0.798 | -0.13 |
| acetate | -0.487 | -0.321 |
| glucAc | -0.229 | -0.509 |
| Rv0950ko | -0.347 | -0.151 |
| Rv1096ko | -0.259 | -0.513 |
| Rv3684ko | -0.282 | 0.275 |
| delta_otsA_trehalose | -1.358 | 0.0 |