Top 10 genes with highest correlation to Rv2089c/pepE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0889c/citA | (cc=0.6204) | info on Rv0889c/citA |
| Rv2629/- | (cc=0.5831) | info on Rv2629/- |
| Rv0203/- | (cc=0.5615) | info on Rv0203/- |
| Rv1632c/- | (cc=0.5542) | info on Rv1632c/- |
| Rv1251c/- | (cc=0.5464) | info on Rv1251c/- |
| Rv1279/- | (cc=0.5395) | info on Rv1279/- |
| Rv1182/papA3 | (cc=0.5362) | info on Rv1182/papA3 |
| Rv3078/hab | (cc=0.5354) | info on Rv3078/hab |
| Rv1681/moeX | (cc=0.5308) | info on Rv1681/moeX |
| Rv2725c/hflX | (cc=0.5288) | info on Rv2725c/hflX |
Correlation of Rv2089c/pepE with Rv1632c/-
Normalized LFCs for Rv2089c/pepE:
(description and provenance of datasets)
| Rv2089c/pepE | Rv1632c/- | |
| Fe_supp_jason_reseq | 0.813 | -1.19 |
| low_pH_jason_reseq | -0.179 | 0.231 |
| NO_jason_reseq | 0.622 | 0.239 |
| B6_jason_reseq | 0.61 | 0.772 |
| MHCII_jason_reseq | 0.0 | 0.957 |
| Isoniazid02 | 0.973 | 1.787 |
| Rifampicin4 | 0.0 | 0.043 |
| Ethambutol3 | 3.413 | 1.718 |
| Meropenem3 | 2.671 | 0.201 |
| Vancomycin16 | 0.796 | 0.21 |
| Rv2680_day32 | -0.471 | 0.098 |
| H37Rv_KO_MarP | -0.785 | 0.202 |
| hypoxia_3wks | 0.136 | 0.227 |
| hypoxia_6wks | 0.702 | 0.38 |
| glycerol | -0.089 | -0.085 |
| cholesterol | 0.627 | -0.711 |
| AJ | 0.131 | 0.571 |
| Bibs02 | 0.51 | 0.244 |
| Bibs02c | 0.784 | 0.258 |
| BL6 | 0.589 | 0.169 |
| BL6a | -0.181 | -0.189 |
| BXD01 | -1.104 | -0.713 |
| BXD010 | -0.435 | -1.353 |
| BXD011 | -1.578 | -0.411 |
| BXD03 | -1.883 | -2.036 |
| BXD04 | -1.268 | -1.527 |
| BXD05 | -0.758 | -1.091 |
| BXD06 | -1.269 | -0.89 |
| BXD07 | -0.338 | -0.601 |
| BXD08 | -1.042 | -0.921 |
| BXD09 | -0.863 | -0.986 |
| CAST | 0.162 | 0.032 |
| CCcont | -0.997 | -1.21 |
| DS01 | 0.409 | 0.168 |
| DS02 | -0.065 | -0.187 |
| DS04 | -0.438 | 0.402 |
| DS0c | 0.506 | 0.514 |
| GP01 | -0.44 | 0.403 |
| GP02 | -1.364 | -1.133 |
| GP0c | -1.19 | -0.764 |
| NOD | 0.576 | 0.091 |
| NZO | 0.37 | 0.613 |
| PWK | 0.388 | 0.193 |
| H37Rv_KO_CtpC | -1.486 | -1.184 |
| H37Rv_KO_CtpD | 0.435 | 0.282 |
| H37Rv_KO_Rv1272 | -0.76 | 0.52 |
| H37Rv_KO_SugABC | 0.588 | 0.138 |
| H37Rv_KO_MbtN | -1.38 | -1.736 |
| Trans05 | -0.183 | -0.696 |
| macrophage_unactivated | -0.641 | -0.565 |
| IL1 | -0.217 | -0.842 |
| Rapamycin | -1.249 | -0.908 |
| Tcell | -1.03 | -0.531 |
| GMCSF | 0.0 | 0.013 |
| IFNab | -0.296 | -0.989 |
| IFNg | -0.262 | -0.107 |
| IFNg_GMCSF1 | -0.553 | -0.339 |
| Rv1432_day32 | -0.24 | 0.656 |
| Rv1565c_day32 | 0.496 | -0.629 |
| secA2_input | 1.188 | -0.935 |
| delta_Rv3594 | 1.634 | 0.555 |
| delta_Rv3717 | 0.594 | 0.218 |
| delta_Rv3811 | 1.866 | 0.225 |
| delta_Rv0954 | 0.0 | -0.136 |
| PonA1 | 0.728 | 0.976 |
| EccD1_KO | 0.51 | 0.319 |
| EspI_KO | 1.343 | 0.348 |
| PE35_KO | 0.621 | -0.388 |
| PPE68_KO | 1.731 | -0.426 |
| glycerol2 | -1.131 | 0.092 |
| lignocerate | -1.047 | 0.401 |
| oleate | -0.872 | 0.859 |
| phosphatidylcholine | -0.798 | 0.539 |
| acetate | -0.487 | 0.08 |
| glucAc | -0.229 | -0.126 |
| Rv0950ko | -0.347 | -0.805 |
| Rv1096ko | -0.259 | -0.739 |
| Rv3684ko | -0.282 | -0.757 |
| delta_otsA_trehalose | -1.358 | -1.151 |