Top 10 genes with highest correlation to Rv2089c/pepE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0889c/citA | (cc=0.6204) | info on Rv0889c/citA |
| Rv2629/- | (cc=0.5831) | info on Rv2629/- |
| Rv0203/- | (cc=0.5615) | info on Rv0203/- |
| Rv1632c/- | (cc=0.5542) | info on Rv1632c/- |
| Rv1251c/- | (cc=0.5464) | info on Rv1251c/- |
| Rv1279/- | (cc=0.5395) | info on Rv1279/- |
| Rv1182/papA3 | (cc=0.5362) | info on Rv1182/papA3 |
| Rv3078/hab | (cc=0.5354) | info on Rv3078/hab |
| Rv1681/moeX | (cc=0.5308) | info on Rv1681/moeX |
| Rv2725c/hflX | (cc=0.5288) | info on Rv2725c/hflX |
Correlation of Rv2089c/pepE with Rv0889c/citA
Normalized LFCs for Rv2089c/pepE:
(description and provenance of datasets)
| Rv2089c/pepE | Rv0889c/citA | |
| Fe_supp_jason_reseq | 0.813 | 0.339 |
| low_pH_jason_reseq | -0.179 | -1.427 |
| NO_jason_reseq | 0.622 | -0.234 |
| B6_jason_reseq | 0.61 | -0.039 |
| MHCII_jason_reseq | 0.0 | 0.549 |
| Isoniazid02 | 0.973 | -0.351 |
| Rifampicin4 | 0.0 | 0.839 |
| Ethambutol3 | 3.413 | 0.353 |
| Meropenem3 | 2.671 | 1.433 |
| Vancomycin16 | 0.796 | 0.631 |
| Rv2680_day32 | -0.471 | -0.465 |
| H37Rv_KO_MarP | -0.785 | -0.502 |
| hypoxia_3wks | 0.136 | -0.478 |
| hypoxia_6wks | 0.702 | -0.543 |
| glycerol | -0.089 | 0.015 |
| cholesterol | 0.627 | -1.504 |
| AJ | 0.131 | -0.229 |
| Bibs02 | 0.51 | 0.072 |
| Bibs02c | 0.784 | -0.165 |
| BL6 | 0.589 | -0.597 |
| BL6a | -0.181 | -1.211 |
| BXD01 | -1.104 | -1.185 |
| BXD010 | -0.435 | -1.154 |
| BXD011 | -1.578 | -1.348 |
| BXD03 | -1.883 | -0.775 |
| BXD04 | -1.268 | -1.597 |
| BXD05 | -0.758 | -1.521 |
| BXD06 | -1.269 | -1.083 |
| BXD07 | -0.338 | -1.296 |
| BXD08 | -1.042 | -1.154 |
| BXD09 | -0.863 | -1.53 |
| CAST | 0.162 | -0.32 |
| CCcont | -0.997 | -0.739 |
| DS01 | 0.409 | -0.378 |
| DS02 | -0.065 | -0.621 |
| DS04 | -0.438 | 0.049 |
| DS0c | 0.506 | -0.365 |
| GP01 | -0.44 | -0.422 |
| GP02 | -1.364 | -0.316 |
| GP0c | -1.19 | -1.483 |
| NOD | 0.576 | 0.838 |
| NZO | 0.37 | -0.088 |
| PWK | 0.388 | 0.641 |
| H37Rv_KO_CtpC | -1.486 | -0.322 |
| H37Rv_KO_CtpD | 0.435 | 0.058 |
| H37Rv_KO_Rv1272 | -0.76 | -2.393 |
| H37Rv_KO_SugABC | 0.588 | -0.184 |
| H37Rv_KO_MbtN | -1.38 | -2.003 |
| Trans05 | -0.183 | -1.2 |
| macrophage_unactivated | -0.641 | -0.877 |
| IL1 | -0.217 | -0.955 |
| Rapamycin | -1.249 | -0.853 |
| Tcell | -1.03 | 0.257 |
| GMCSF | 0.0 | -1.225 |
| IFNab | -0.296 | -1.076 |
| IFNg | -0.262 | -0.599 |
| IFNg_GMCSF1 | -0.553 | -0.54 |
| Rv1432_day32 | -0.24 | 0.202 |
| Rv1565c_day32 | 0.496 | 0.043 |
| secA2_input | 1.188 | 0.02 |
| delta_Rv3594 | 1.634 | -0.298 |
| delta_Rv3717 | 0.594 | -0.395 |
| delta_Rv3811 | 1.866 | -0.207 |
| delta_Rv0954 | 0.0 | 0.952 |
| PonA1 | 0.728 | 0.604 |
| EccD1_KO | 0.51 | -0.401 |
| EspI_KO | 1.343 | 0.896 |
| PE35_KO | 0.621 | 0.729 |
| PPE68_KO | 1.731 | 1.005 |
| glycerol2 | -1.131 | -1.939 |
| lignocerate | -1.047 | -1.405 |
| oleate | -0.872 | -1.697 |
| phosphatidylcholine | -0.798 | -1.606 |
| acetate | -0.487 | -1.559 |
| glucAc | -0.229 | -0.884 |
| Rv0950ko | -0.347 | -0.495 |
| Rv1096ko | -0.259 | -0.277 |
| Rv3684ko | -0.282 | -0.537 |
| delta_otsA_trehalose | -1.358 | -0.523 |