Top 10 genes with highest correlation to Rv2077c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1781c/malQ | (cc=0.588) | info on Rv1781c/malQ |
| Rv3738c/PPE66 | (cc=0.537) | info on Rv3738c/PPE66 |
| Rv3688c/- | (cc=0.5317) | info on Rv3688c/- |
| Rv1103c/mazE3 | (cc=0.5285) | info on Rv1103c/mazE3 |
| Rv2390c/- | (cc=0.526) | info on Rv2390c/- |
| Rv0194/- | (cc=0.5153) | info on Rv0194/- |
| Rv1045/- | (cc=0.4897) | info on Rv1045/- |
| Rv2602/vapC41 | (cc=0.4682) | info on Rv2602/vapC41 |
| Rv1263/amiB2 | (cc=0.4636) | info on Rv1263/amiB2 |
| Rv0572c/- | (cc=0.4501) | info on Rv0572c/- |
Correlation of Rv2077c/- with Rv2602/vapC41
Normalized LFCs for Rv2077c/-:
(description and provenance of datasets)
| Rv2077c/- | Rv2602/vapC41 | |
| Fe_supp_jason_reseq | -0.658 | 0.177 |
| low_pH_jason_reseq | -0.442 | -1.456 |
| NO_jason_reseq | 0.249 | -0.507 |
| B6_jason_reseq | 0.26 | -0.245 |
| MHCII_jason_reseq | -0.431 | 0.183 |
| Isoniazid02 | -0.18 | -1.794 |
| Rifampicin4 | 0.043 | 0.403 |
| Ethambutol3 | -0.505 | -1.769 |
| Meropenem3 | -0.181 | -1.022 |
| Vancomycin16 | -0.143 | -0.836 |
| Rv2680_day32 | 0.272 | 0.05 |
| H37Rv_KO_MarP | 0.113 | 0.052 |
| hypoxia_3wks | 0.355 | -0.227 |
| hypoxia_6wks | 0.198 | -0.299 |
| glycerol | -0.357 | -1.008 |
| cholesterol | -0.385 | 0.234 |
| AJ | 0.161 | 0.837 |
| Bibs02 | 0.465 | -0.543 |
| Bibs02c | -0.064 | 0.191 |
| BL6 | 0.336 | 0.597 |
| BL6a | 0.116 | -0.096 |
| BXD01 | -0.309 | 0.043 |
| BXD010 | -0.019 | -0.593 |
| BXD011 | -0.142 | 0.0 |
| BXD03 | -0.295 | -0.346 |
| BXD04 | -0.317 | 0.19 |
| BXD05 | -0.128 | -0.379 |
| BXD06 | -0.031 | 0.042 |
| BXD07 | -0.215 | -0.134 |
| BXD08 | 0.13 | 0.194 |
| BXD09 | 0.032 | -0.072 |
| CAST | -0.367 | -0.656 |
| CCcont | -0.148 | -0.048 |
| DS01 | -0.195 | -0.452 |
| DS02 | -0.243 | -0.44 |
| DS04 | 0.195 | 0.649 |
| DS0c | -0.556 | -0.195 |
| GP01 | 0.514 | -0.556 |
| GP02 | 0.626 | -0.242 |
| GP0c | 0.205 | -0.075 |
| NOD | -0.096 | 0.2 |
| NZO | -0.101 | -0.15 |
| PWK | 0.409 | 0.279 |
| H37Rv_KO_CtpC | 0.304 | -0.497 |
| H37Rv_KO_CtpD | 0.53 | -0.614 |
| H37Rv_KO_Rv1272 | 0.412 | 0.157 |
| H37Rv_KO_SugABC | 0.799 | 0.765 |
| H37Rv_KO_MbtN | 0.307 | -0.561 |
| Trans05 | 0.764 | 1.492 |
| macrophage_unactivated | -0.06 | -0.606 |
| IL1 | 0.294 | -0.644 |
| Rapamycin | -0.325 | 0.028 |
| Tcell | -0.463 | -0.639 |
| GMCSF | -0.227 | -0.65 |
| IFNab | 0.042 | -0.221 |
| IFNg | 0.345 | -0.738 |
| IFNg_GMCSF1 | -0.544 | 0.069 |
| Rv1432_day32 | 0.143 | 0.145 |
| Rv1565c_day32 | 0.103 | 0.559 |
| secA2_input | 0.158 | -0.565 |
| delta_Rv3594 | -0.323 | 0.257 |
| delta_Rv3717 | -0.339 | 0.254 |
| delta_Rv3811 | -0.03 | -0.12 |
| delta_Rv0954 | 0.388 | 0.411 |
| PonA1 | 0.055 | 1.002 |
| EccD1_KO | -0.464 | -0.727 |
| EspI_KO | -0.268 | -0.231 |
| PE35_KO | -1.024 | -1.123 |
| PPE68_KO | -0.819 | -1.385 |
| glycerol2 | 0.928 | 0.682 |
| lignocerate | 0.906 | 0.867 |
| oleate | 0.808 | 1.969 |
| phosphatidylcholine | 1.206 | 0.885 |
| acetate | 0.527 | 0.248 |
| glucAc | 0.385 | 0.352 |
| Rv0950ko | 0.525 | -0.781 |
| Rv1096ko | 0.036 | -0.54 |
| Rv3684ko | 0.393 | -0.337 |
| delta_otsA_trehalose | 0.628 | -0.886 |