Top 10 genes with highest correlation to Rv2077c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1781c/malQ | (cc=0.588) | info on Rv1781c/malQ |
| Rv3738c/PPE66 | (cc=0.537) | info on Rv3738c/PPE66 |
| Rv3688c/- | (cc=0.5317) | info on Rv3688c/- |
| Rv1103c/mazE3 | (cc=0.5285) | info on Rv1103c/mazE3 |
| Rv2390c/- | (cc=0.526) | info on Rv2390c/- |
| Rv0194/- | (cc=0.5153) | info on Rv0194/- |
| Rv1045/- | (cc=0.4897) | info on Rv1045/- |
| Rv2602/vapC41 | (cc=0.4682) | info on Rv2602/vapC41 |
| Rv1263/amiB2 | (cc=0.4636) | info on Rv1263/amiB2 |
| Rv0572c/- | (cc=0.4501) | info on Rv0572c/- |
Correlation of Rv2077c/- with Rv1045/-
Normalized LFCs for Rv2077c/-:
(description and provenance of datasets)
| Rv2077c/- | Rv1045/- | |
| Fe_supp_jason_reseq | -0.658 | -0.237 |
| low_pH_jason_reseq | -0.442 | -0.199 |
| NO_jason_reseq | 0.249 | -0.192 |
| B6_jason_reseq | 0.26 | -1.018 |
| MHCII_jason_reseq | -0.431 | -0.226 |
| Isoniazid02 | -0.18 | -0.34 |
| Rifampicin4 | 0.043 | -0.42 |
| Ethambutol3 | -0.505 | -0.648 |
| Meropenem3 | -0.181 | -0.333 |
| Vancomycin16 | -0.143 | -0.467 |
| Rv2680_day32 | 0.272 | 1.033 |
| H37Rv_KO_MarP | 0.113 | 0.34 |
| hypoxia_3wks | 0.355 | -0.742 |
| hypoxia_6wks | 0.198 | 0.104 |
| glycerol | -0.357 | -0.227 |
| cholesterol | -0.385 | -0.35 |
| AJ | 0.161 | 0.422 |
| Bibs02 | 0.465 | -0.163 |
| Bibs02c | -0.064 | -0.267 |
| BL6 | 0.336 | -0.787 |
| BL6a | 0.116 | -0.428 |
| BXD01 | -0.309 | -1.129 |
| BXD010 | -0.019 | -0.847 |
| BXD011 | -0.142 | -0.747 |
| BXD03 | -0.295 | -0.141 |
| BXD04 | -0.317 | -1.072 |
| BXD05 | -0.128 | -1.075 |
| BXD06 | -0.031 | -0.962 |
| BXD07 | -0.215 | -1.291 |
| BXD08 | 0.13 | -0.688 |
| BXD09 | 0.032 | -0.642 |
| CAST | -0.367 | -0.249 |
| CCcont | -0.148 | -0.62 |
| DS01 | -0.195 | 0.056 |
| DS02 | -0.243 | -0.277 |
| DS04 | 0.195 | -0.24 |
| DS0c | -0.556 | -0.424 |
| GP01 | 0.514 | 0.366 |
| GP02 | 0.626 | 0.979 |
| GP0c | 0.205 | 0.148 |
| NOD | -0.096 | 0.807 |
| NZO | -0.101 | -0.634 |
| PWK | 0.409 | -0.212 |
| H37Rv_KO_CtpC | 0.304 | 0.0 |
| H37Rv_KO_CtpD | 0.53 | 0.586 |
| H37Rv_KO_Rv1272 | 0.412 | -0.224 |
| H37Rv_KO_SugABC | 0.799 | -0.265 |
| H37Rv_KO_MbtN | 0.307 | -1.051 |
| Trans05 | 0.764 | 1.175 |
| macrophage_unactivated | -0.06 | -0.571 |
| IL1 | 0.294 | -0.128 |
| Rapamycin | -0.325 | -0.433 |
| Tcell | -0.463 | -0.72 |
| GMCSF | -0.227 | -0.055 |
| IFNab | 0.042 | -0.221 |
| IFNg | 0.345 | -0.134 |
| IFNg_GMCSF1 | -0.544 | 0.361 |
| Rv1432_day32 | 0.143 | -0.078 |
| Rv1565c_day32 | 0.103 | 0.227 |
| secA2_input | 0.158 | -1.504 |
| delta_Rv3594 | -0.323 | -0.987 |
| delta_Rv3717 | -0.339 | -0.361 |
| delta_Rv3811 | -0.03 | -0.503 |
| delta_Rv0954 | 0.388 | -0.211 |
| PonA1 | 0.055 | -0.434 |
| EccD1_KO | -0.464 | -0.503 |
| EspI_KO | -0.268 | 0.0 |
| PE35_KO | -1.024 | -0.718 |
| PPE68_KO | -0.819 | -1.273 |
| glycerol2 | 0.928 | 0.277 |
| lignocerate | 0.906 | 1.024 |
| oleate | 0.808 | -0.326 |
| phosphatidylcholine | 1.206 | 0.497 |
| acetate | 0.527 | 0.758 |
| glucAc | 0.385 | 0.823 |
| Rv0950ko | 0.525 | -0.018 |
| Rv1096ko | 0.036 | -0.072 |
| Rv3684ko | 0.393 | 0.786 |
| delta_otsA_trehalose | 0.628 | 0.12 |