Top 10 genes with highest correlation to Rv2077c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1781c/malQ | (cc=0.588) | info on Rv1781c/malQ |
| Rv3738c/PPE66 | (cc=0.537) | info on Rv3738c/PPE66 |
| Rv3688c/- | (cc=0.5317) | info on Rv3688c/- |
| Rv1103c/mazE3 | (cc=0.5285) | info on Rv1103c/mazE3 |
| Rv2390c/- | (cc=0.526) | info on Rv2390c/- |
| Rv0194/- | (cc=0.5153) | info on Rv0194/- |
| Rv1045/- | (cc=0.4897) | info on Rv1045/- |
| Rv2602/vapC41 | (cc=0.4682) | info on Rv2602/vapC41 |
| Rv1263/amiB2 | (cc=0.4636) | info on Rv1263/amiB2 |
| Rv0572c/- | (cc=0.4501) | info on Rv0572c/- |
Correlation of Rv2077c/- with Rv1781c/malQ
Normalized LFCs for Rv2077c/-:
(description and provenance of datasets)
| Rv2077c/- | Rv1781c/malQ | |
| Fe_supp_jason_reseq | -0.658 | -0.549 |
| low_pH_jason_reseq | -0.442 | -0.54 |
| NO_jason_reseq | 0.249 | -0.105 |
| B6_jason_reseq | 0.26 | -0.496 |
| MHCII_jason_reseq | -0.431 | 0.452 |
| Isoniazid02 | -0.18 | -0.544 |
| Rifampicin4 | 0.043 | 0.468 |
| Ethambutol3 | -0.505 | -0.426 |
| Meropenem3 | -0.181 | 0.226 |
| Vancomycin16 | -0.143 | -0.398 |
| Rv2680_day32 | 0.272 | 0.656 |
| H37Rv_KO_MarP | 0.113 | 0.0 |
| hypoxia_3wks | 0.355 | -0.283 |
| hypoxia_6wks | 0.198 | -0.278 |
| glycerol | -0.357 | -0.072 |
| cholesterol | -0.385 | -0.311 |
| AJ | 0.161 | 0.094 |
| Bibs02 | 0.465 | 0.146 |
| Bibs02c | -0.064 | 0.565 |
| BL6 | 0.336 | -0.066 |
| BL6a | 0.116 | 0.093 |
| BXD01 | -0.309 | -0.443 |
| BXD010 | -0.019 | -0.096 |
| BXD011 | -0.142 | -0.209 |
| BXD03 | -0.295 | -0.541 |
| BXD04 | -0.317 | -0.546 |
| BXD05 | -0.128 | -0.174 |
| BXD06 | -0.031 | -0.589 |
| BXD07 | -0.215 | 0.042 |
| BXD08 | 0.13 | -0.192 |
| BXD09 | 0.032 | -0.446 |
| CAST | -0.367 | 0.279 |
| CCcont | -0.148 | -0.74 |
| DS01 | -0.195 | -0.214 |
| DS02 | -0.243 | -0.271 |
| DS04 | 0.195 | 0.513 |
| DS0c | -0.556 | -0.465 |
| GP01 | 0.514 | 0.99 |
| GP02 | 0.626 | 1.591 |
| GP0c | 0.205 | 0.908 |
| NOD | -0.096 | 0.451 |
| NZO | -0.101 | 0.153 |
| PWK | 0.409 | 0.273 |
| H37Rv_KO_CtpC | 0.304 | 0.177 |
| H37Rv_KO_CtpD | 0.53 | 0.714 |
| H37Rv_KO_Rv1272 | 0.412 | 0.246 |
| H37Rv_KO_SugABC | 0.799 | 0.576 |
| H37Rv_KO_MbtN | 0.307 | 0.174 |
| Trans05 | 0.764 | 0.428 |
| macrophage_unactivated | -0.06 | -0.237 |
| IL1 | 0.294 | -0.35 |
| Rapamycin | -0.325 | -0.123 |
| Tcell | -0.463 | -0.779 |
| GMCSF | -0.227 | -0.721 |
| IFNab | 0.042 | 0.0 |
| IFNg | 0.345 | 0.134 |
| IFNg_GMCSF1 | -0.544 | -0.292 |
| Rv1432_day32 | 0.143 | 0.57 |
| Rv1565c_day32 | 0.103 | -0.011 |
| secA2_input | 0.158 | 0.249 |
| delta_Rv3594 | -0.323 | -0.24 |
| delta_Rv3717 | -0.339 | 0.284 |
| delta_Rv3811 | -0.03 | 0.138 |
| delta_Rv0954 | 0.388 | 0.183 |
| PonA1 | 0.055 | -0.095 |
| EccD1_KO | -0.464 | -0.207 |
| EspI_KO | -0.268 | 0.282 |
| PE35_KO | -1.024 | -0.715 |
| PPE68_KO | -0.819 | -0.745 |
| glycerol2 | 0.928 | 0.502 |
| lignocerate | 0.906 | 0.436 |
| oleate | 0.808 | 0.384 |
| phosphatidylcholine | 1.206 | 0.65 |
| acetate | 0.527 | -0.057 |
| glucAc | 0.385 | -0.241 |
| Rv0950ko | 0.525 | -0.054 |
| Rv1096ko | 0.036 | 0.211 |
| Rv3684ko | 0.393 | -0.262 |
| delta_otsA_trehalose | 0.628 | -0.034 |