Top 10 genes with highest correlation to Rv2056c/rpsN2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1583c/- | (cc=0.5392) | info on Rv1583c/- |
| Rv3818/- | (cc=0.5002) | info on Rv3818/- |
| Rv3166c/- | (cc=0.4898) | info on Rv3166c/- |
| Rv3050c/- | (cc=0.4894) | info on Rv3050c/- |
| Rv2818c/- | (cc=0.4831) | info on Rv2818c/- |
| Rv1116/- | (cc=0.4732) | info on Rv1116/- |
| Rv2038c/- | (cc=0.4624) | info on Rv2038c/- |
| Rv0181c/- | (cc=0.4601) | info on Rv0181c/- |
| Rv2548/vapC19 | (cc=0.4552) | info on Rv2548/vapC19 |
| Rv2510c/- | (cc=0.4518) | info on Rv2510c/- |
Correlation of Rv2056c/rpsN2 with Rv2038c/-
Normalized LFCs for Rv2056c/rpsN2:
(description and provenance of datasets)
| Rv2056c/rpsN2 | Rv2038c/- | |
| Fe_supp_jason_reseq | -0.418 | -1.699 |
| low_pH_jason_reseq | -0.139 | -0.127 |
| NO_jason_reseq | -1.551 | -0.465 |
| B6_jason_reseq | -0.544 | -2.64 |
| MHCII_jason_reseq | -2.584 | -0.977 |
| Isoniazid02 | 0.554 | 0.115 |
| Rifampicin4 | -0.493 | -0.149 |
| Ethambutol3 | 0.482 | -0.067 |
| Meropenem3 | 0.422 | -0.321 |
| Vancomycin16 | -1.17 | 0.21 |
| Rv2680_day32 | -1.806 | -1.358 |
| H37Rv_KO_MarP | -0.097 | 0.207 |
| hypoxia_3wks | -0.969 | -0.183 |
| hypoxia_6wks | 0.102 | 1.462 |
| glycerol | -1.697 | -1.252 |
| cholesterol | -1.309 | -1.217 |
| AJ | -1.95 | -0.494 |
| Bibs02 | -2.551 | -1.537 |
| Bibs02c | -1.516 | -0.591 |
| BL6 | 1.704 | 1.212 |
| BL6a | 1.666 | 0.106 |
| BXD01 | 0.07 | -0.074 |
| BXD010 | 0.837 | 0.34 |
| BXD011 | 1.889 | 0.888 |
| BXD03 | 2.304 | 0.622 |
| BXD04 | 1.055 | 0.612 |
| BXD05 | 1.762 | 1.52 |
| BXD06 | 1.604 | 0.438 |
| BXD07 | 1.4 | 0.731 |
| BXD08 | 1.274 | 0.849 |
| BXD09 | 2.713 | 0.979 |
| CAST | -1.545 | 0.184 |
| CCcont | 1.346 | 0.764 |
| DS01 | -1.348 | -0.936 |
| DS02 | -3.034 | -1.575 |
| DS04 | 3.387 | -0.225 |
| DS0c | -1.455 | -0.251 |
| GP01 | 1.389 | 1.204 |
| GP02 | 0.48 | 0.544 |
| GP0c | 1.481 | 0.598 |
| NOD | -0.983 | -0.404 |
| NZO | 0.881 | 0.306 |
| PWK | -2.363 | -0.627 |
| H37Rv_KO_CtpC | 1.625 | 0.087 |
| H37Rv_KO_CtpD | -1.419 | 1.034 |
| H37Rv_KO_Rv1272 | -1.58 | 1.002 |
| H37Rv_KO_SugABC | -0.354 | 0.784 |
| H37Rv_KO_MbtN | -0.329 | 1.145 |
| Trans05 | -1.181 | 2.398 |
| macrophage_unactivated | -1.531 | -0.246 |
| IL1 | -0.973 | 1.397 |
| Rapamycin | -1.163 | -0.239 |
| Tcell | -0.404 | 0.544 |
| GMCSF | 2.078 | 0.38 |
| IFNab | 0.0 | 0.834 |
| IFNg | -0.355 | 0.738 |
| IFNg_GMCSF1 | 0.025 | 0.93 |
| Rv1432_day32 | 1.516 | -0.614 |
| Rv1565c_day32 | 0.235 | 0.096 |
| secA2_input | 0.484 | -0.504 |
| delta_Rv3594 | -0.153 | 0.035 |
| delta_Rv3717 | -0.518 | -0.218 |
| delta_Rv3811 | 0.015 | 0.034 |
| delta_Rv0954 | -4.858 | -0.864 |
| PonA1 | -1.46 | -2.363 |
| EccD1_KO | 0.786 | 0.914 |
| EspI_KO | 0.739 | -0.257 |
| PE35_KO | -1.009 | 0.187 |
| PPE68_KO | -0.918 | -0.678 |
| glycerol2 | -2.163 | 0.607 |
| lignocerate | -0.522 | 1.538 |
| oleate | -1.874 | -1.418 |
| phosphatidylcholine | -1.234 | 0.531 |
| acetate | 0.903 | 1.998 |
| glucAc | 0.853 | 1.735 |
| Rv0950ko | -3.082 | -1.049 |
| Rv1096ko | -3.082 | 0.0 |
| Rv3684ko | -1.952 | -0.727 |
| delta_otsA_trehalose | 1.783 | 0.087 |