Top 10 genes with highest correlation to Rv2056c/rpsN2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1583c/- | (cc=0.5392) | info on Rv1583c/- |
| Rv3818/- | (cc=0.5002) | info on Rv3818/- |
| Rv3166c/- | (cc=0.4898) | info on Rv3166c/- |
| Rv3050c/- | (cc=0.4894) | info on Rv3050c/- |
| Rv2818c/- | (cc=0.4831) | info on Rv2818c/- |
| Rv1116/- | (cc=0.4732) | info on Rv1116/- |
| Rv2038c/- | (cc=0.4624) | info on Rv2038c/- |
| Rv0181c/- | (cc=0.4601) | info on Rv0181c/- |
| Rv2548/vapC19 | (cc=0.4552) | info on Rv2548/vapC19 |
| Rv2510c/- | (cc=0.4518) | info on Rv2510c/- |
Correlation of Rv2056c/rpsN2 with Rv1583c/-
Normalized LFCs for Rv2056c/rpsN2:
(description and provenance of datasets)
| Rv2056c/rpsN2 | Rv1583c/- | |
| Fe_supp_jason_reseq | -0.418 | 0.515 |
| low_pH_jason_reseq | -0.139 | 1.549 |
| NO_jason_reseq | -1.551 | 0.832 |
| B6_jason_reseq | -0.544 | -2.401 |
| MHCII_jason_reseq | -2.584 | -1.772 |
| Isoniazid02 | 0.554 | 0.789 |
| Rifampicin4 | -0.493 | 1.18 |
| Ethambutol3 | 0.482 | 0.676 |
| Meropenem3 | 0.422 | -0.246 |
| Vancomycin16 | -1.17 | 0.324 |
| Rv2680_day32 | -1.806 | -1.26 |
| H37Rv_KO_MarP | -0.097 | 0.107 |
| hypoxia_3wks | -0.969 | -0.977 |
| hypoxia_6wks | 0.102 | 0.672 |
| glycerol | -1.697 | 0.0 |
| cholesterol | -1.309 | -0.46 |
| AJ | -1.95 | -1.071 |
| Bibs02 | -2.551 | -0.991 |
| Bibs02c | -1.516 | 0.743 |
| BL6 | 1.704 | 3.191 |
| BL6a | 1.666 | 1.936 |
| BXD01 | 0.07 | 1.298 |
| BXD010 | 0.837 | 1.592 |
| BXD011 | 1.889 | 2.091 |
| BXD03 | 2.304 | 2.033 |
| BXD04 | 1.055 | 1.324 |
| BXD05 | 1.762 | 1.302 |
| BXD06 | 1.604 | 1.925 |
| BXD07 | 1.4 | 2.073 |
| BXD08 | 1.274 | 1.806 |
| BXD09 | 2.713 | 1.625 |
| CAST | -1.545 | 0.736 |
| CCcont | 1.346 | 2.504 |
| DS01 | -1.348 | 0.962 |
| DS02 | -3.034 | 0.054 |
| DS04 | 3.387 | 1.612 |
| DS0c | -1.455 | -1.798 |
| GP01 | 1.389 | 1.857 |
| GP02 | 0.48 | 1.808 |
| GP0c | 1.481 | 2.036 |
| NOD | -0.983 | 0.797 |
| NZO | 0.881 | 0.673 |
| PWK | -2.363 | -0.905 |
| H37Rv_KO_CtpC | 1.625 | 1.404 |
| H37Rv_KO_CtpD | -1.419 | 3.186 |
| H37Rv_KO_Rv1272 | -1.58 | 0.795 |
| H37Rv_KO_SugABC | -0.354 | 1.851 |
| H37Rv_KO_MbtN | -0.329 | 0.987 |
| Trans05 | -1.181 | 1.01 |
| macrophage_unactivated | -1.531 | 0.559 |
| IL1 | -0.973 | 0.0 |
| Rapamycin | -1.163 | 0.862 |
| Tcell | -0.404 | 0.469 |
| GMCSF | 2.078 | 0.805 |
| IFNab | 0.0 | -0.115 |
| IFNg | -0.355 | 1.219 |
| IFNg_GMCSF1 | 0.025 | 0.537 |
| Rv1432_day32 | 1.516 | 1.454 |
| Rv1565c_day32 | 0.235 | 0.526 |
| secA2_input | 0.484 | -0.227 |
| delta_Rv3594 | -0.153 | -1.637 |
| delta_Rv3717 | -0.518 | -0.945 |
| delta_Rv3811 | 0.015 | -0.448 |
| delta_Rv0954 | -4.858 | -0.472 |
| PonA1 | -1.46 | -0.396 |
| EccD1_KO | 0.786 | 2.088 |
| EspI_KO | 0.739 | 1.141 |
| PE35_KO | -1.009 | 1.523 |
| PPE68_KO | -0.918 | 1.638 |
| glycerol2 | -2.163 | 1.813 |
| lignocerate | -0.522 | 2.527 |
| oleate | -1.874 | -2.562 |
| phosphatidylcholine | -1.234 | 1.909 |
| acetate | 0.903 | 2.818 |
| glucAc | 0.853 | 2.145 |
| Rv0950ko | -3.082 | 0.826 |
| Rv1096ko | -3.082 | -1.197 |
| Rv3684ko | -1.952 | -1.251 |
| delta_otsA_trehalose | 1.783 | 0.204 |