Top 10 genes with highest correlation to Rv2056c/rpsN2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1583c/- | (cc=0.5392) | info on Rv1583c/- |
| Rv3818/- | (cc=0.5002) | info on Rv3818/- |
| Rv3166c/- | (cc=0.4898) | info on Rv3166c/- |
| Rv3050c/- | (cc=0.4894) | info on Rv3050c/- |
| Rv2818c/- | (cc=0.4831) | info on Rv2818c/- |
| Rv1116/- | (cc=0.4732) | info on Rv1116/- |
| Rv2038c/- | (cc=0.4624) | info on Rv2038c/- |
| Rv0181c/- | (cc=0.4601) | info on Rv0181c/- |
| Rv2548/vapC19 | (cc=0.4552) | info on Rv2548/vapC19 |
| Rv2510c/- | (cc=0.4518) | info on Rv2510c/- |
Correlation of Rv2056c/rpsN2 with Rv0181c/-
Normalized LFCs for Rv2056c/rpsN2:
(description and provenance of datasets)
| Rv2056c/rpsN2 | Rv0181c/- | |
| Fe_supp_jason_reseq | -0.418 | -0.17 |
| low_pH_jason_reseq | -0.139 | 0.405 |
| NO_jason_reseq | -1.551 | 1.638 |
| B6_jason_reseq | -0.544 | 0.841 |
| MHCII_jason_reseq | -2.584 | -1.016 |
| Isoniazid02 | 0.554 | -1.072 |
| Rifampicin4 | -0.493 | 0.0 |
| Ethambutol3 | 0.482 | 0.473 |
| Meropenem3 | 0.422 | 1.101 |
| Vancomycin16 | -1.17 | 0.17 |
| Rv2680_day32 | -1.806 | 1.66 |
| H37Rv_KO_MarP | -0.097 | 0.731 |
| hypoxia_3wks | -0.969 | -0.658 |
| hypoxia_6wks | 0.102 | 0.543 |
| glycerol | -1.697 | -1.575 |
| cholesterol | -1.309 | 0.19 |
| AJ | -1.95 | -0.266 |
| Bibs02 | -2.551 | -0.193 |
| Bibs02c | -1.516 | 0.385 |
| BL6 | 1.704 | 2.071 |
| BL6a | 1.666 | 1.419 |
| BXD01 | 0.07 | 2.73 |
| BXD010 | 0.837 | 1.723 |
| BXD011 | 1.889 | 2.794 |
| BXD03 | 2.304 | 1.363 |
| BXD04 | 1.055 | 2.335 |
| BXD05 | 1.762 | 1.201 |
| BXD06 | 1.604 | 2.002 |
| BXD07 | 1.4 | 2.818 |
| BXD08 | 1.274 | 2.041 |
| BXD09 | 2.713 | 2.249 |
| CAST | -1.545 | 0.053 |
| CCcont | 1.346 | 0.824 |
| DS01 | -1.348 | -0.417 |
| DS02 | -3.034 | -0.268 |
| DS04 | 3.387 | 0.2 |
| DS0c | -1.455 | -0.324 |
| GP01 | 1.389 | 0.627 |
| GP02 | 0.48 | 1.496 |
| GP0c | 1.481 | 1.134 |
| NOD | -0.983 | -0.356 |
| NZO | 0.881 | 0.38 |
| PWK | -2.363 | 0.544 |
| H37Rv_KO_CtpC | 1.625 | 0.038 |
| H37Rv_KO_CtpD | -1.419 | 0.664 |
| H37Rv_KO_Rv1272 | -1.58 | 1.081 |
| H37Rv_KO_SugABC | -0.354 | 0.281 |
| H37Rv_KO_MbtN | -0.329 | 0.135 |
| Trans05 | -1.181 | 0.282 |
| macrophage_unactivated | -1.531 | -0.407 |
| IL1 | -0.973 | 1.05 |
| Rapamycin | -1.163 | 0.5 |
| Tcell | -0.404 | -0.375 |
| GMCSF | 2.078 | -0.795 |
| IFNab | 0.0 | -0.369 |
| IFNg | -0.355 | 0.176 |
| IFNg_GMCSF1 | 0.025 | -0.258 |
| Rv1432_day32 | 1.516 | 2.235 |
| Rv1565c_day32 | 0.235 | -0.643 |
| secA2_input | 0.484 | 0.297 |
| delta_Rv3594 | -0.153 | 1.094 |
| delta_Rv3717 | -0.518 | 1.06 |
| delta_Rv3811 | 0.015 | 1.124 |
| delta_Rv0954 | -4.858 | 0.61 |
| PonA1 | -1.46 | 0.314 |
| EccD1_KO | 0.786 | -0.122 |
| EspI_KO | 0.739 | -0.077 |
| PE35_KO | -1.009 | -0.3 |
| PPE68_KO | -0.918 | -0.118 |
| glycerol2 | -2.163 | 0.258 |
| lignocerate | -0.522 | -0.102 |
| oleate | -1.874 | 0.371 |
| phosphatidylcholine | -1.234 | -0.31 |
| acetate | 0.903 | 0.306 |
| glucAc | 0.853 | 0.425 |
| Rv0950ko | -3.082 | -0.305 |
| Rv1096ko | -3.082 | -0.305 |
| Rv3684ko | -1.952 | 0.157 |
| delta_otsA_trehalose | 1.783 | 2.031 |