Top 10 genes with highest correlation to Rv2048c/pks12:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0202c/mmpL11 | (cc=0.8539) | info on Rv0202c/mmpL11 |
| Rv2047c/- | (cc=0.8168) | info on Rv2047c/- |
| Rv1127c/ppdK | (cc=0.782) | info on Rv1127c/ppdK |
| Rv3501c/yrbE4A | (cc=0.6777) | info on Rv3501c/yrbE4A |
| Rv3495c/lprN | (cc=0.6732) | info on Rv3495c/lprN |
| Rv3500c/yrbE4B | (cc=0.664) | info on Rv3500c/yrbE4B |
| Rv3497c/mce4C | (cc=0.6377) | info on Rv3497c/mce4C |
| Rv3498c/mce4B | (cc=0.6299) | info on Rv3498c/mce4B |
| Rv3492c/- | (cc=0.6249) | info on Rv3492c/- |
| Rv3496c/mce4D | (cc=0.6243) | info on Rv3496c/mce4D |
Correlation of Rv2048c/pks12 with Rv3500c/yrbE4B
Normalized LFCs for Rv2048c/pks12:
(description and provenance of datasets)
| Rv2048c/pks12 | Rv3500c/yrbE4B | |
| Fe_supp_jason_reseq | 1.149 | 0.041 |
| low_pH_jason_reseq | 1.35 | -0.982 |
| NO_jason_reseq | -1.089 | 0.562 |
| B6_jason_reseq | -0.461 | -1.459 |
| MHCII_jason_reseq | -0.735 | -2.141 |
| Isoniazid02 | 0.135 | 0.013 |
| Rifampicin4 | 0.374 | -0.038 |
| Ethambutol3 | -0.153 | 0.225 |
| Meropenem3 | -0.422 | -0.568 |
| Vancomycin16 | 2.491 | 0.533 |
| Rv2680_day32 | -1.824 | -2.969 |
| H37Rv_KO_MarP | -0.43 | 0.028 |
| hypoxia_3wks | -0.407 | 0.391 |
| hypoxia_6wks | -0.069 | 0.155 |
| glycerol | -1.805 | -2.465 |
| cholesterol | -1.954 | -4.573 |
| AJ | -1.681 | -3.361 |
| Bibs02 | -0.682 | -0.917 |
| Bibs02c | -0.703 | -1.103 |
| BL6 | -0.376 | -1.464 |
| BL6a | -0.891 | -1.852 |
| BXD01 | -0.944 | -1.302 |
| BXD010 | -0.928 | -0.174 |
| BXD011 | -0.34 | -0.948 |
| BXD03 | -0.844 | -1.828 |
| BXD04 | -1.032 | -1.196 |
| BXD05 | -0.605 | -0.647 |
| BXD06 | -0.967 | -1.092 |
| BXD07 | -0.8 | -1.748 |
| BXD08 | -0.496 | -1.596 |
| BXD09 | -1.346 | -1.394 |
| CAST | -1.792 | -2.544 |
| CCcont | 0.659 | -0.652 |
| DS01 | -2.262 | -3.247 |
| DS02 | -2.229 | -2.382 |
| DS04 | -1.211 | -2.534 |
| DS0c | -1.354 | -1.516 |
| GP01 | 0.649 | -0.082 |
| GP02 | 0.872 | -0.734 |
| GP0c | 0.33 | -0.408 |
| NOD | -1.298 | -2.673 |
| NZO | -0.98 | -2.114 |
| PWK | -1.421 | -2.316 |
| H37Rv_KO_CtpC | -0.731 | -1.028 |
| H37Rv_KO_CtpD | -0.732 | -0.447 |
| H37Rv_KO_Rv1272 | -0.329 | -0.852 |
| H37Rv_KO_SugABC | -0.487 | 0.509 |
| H37Rv_KO_MbtN | 0.706 | 0.869 |
| Trans05 | 0.598 | -0.127 |
| macrophage_unactivated | -1.588 | -0.619 |
| IL1 | 2.429 | 2.213 |
| Rapamycin | 1.525 | 2.059 |
| Tcell | 0.0 | 0.257 |
| GMCSF | -3.034 | -1.964 |
| IFNab | -0.846 | -2.08 |
| IFNg | -1.451 | -0.612 |
| IFNg_GMCSF1 | -1.332 | -1.049 |
| Rv1432_day32 | -1.229 | -2.967 |
| Rv1565c_day32 | -1.529 | -2.853 |
| secA2_input | -0.704 | -0.316 |
| delta_Rv3594 | 0.193 | -0.066 |
| delta_Rv3717 | 0.097 | -0.42 |
| delta_Rv3811 | 0.222 | -0.04 |
| delta_Rv0954 | 0.163 | -0.419 |
| PonA1 | 0.624 | 0.129 |
| EccD1_KO | -0.845 | 0.572 |
| EspI_KO | -0.836 | 0.088 |
| PE35_KO | 0.636 | -0.362 |
| PPE68_KO | -0.096 | -0.195 |
| glycerol2 | -1.307 | -0.412 |
| lignocerate | -1.136 | 0.546 |
| oleate | -0.315 | 1.51 |
| phosphatidylcholine | -1.307 | -0.01 |
| acetate | -0.507 | -0.288 |
| glucAc | 0.135 | 0.103 |
| Rv0950ko | -0.416 | 0.446 |
| Rv1096ko | -0.416 | 0.238 |
| Rv3684ko | -0.845 | 0.563 |
| delta_otsA_trehalose | -0.311 | 0.05 |