Top 10 genes with highest correlation to Rv2048c/pks12:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0202c/mmpL11 | (cc=0.8539) | info on Rv0202c/mmpL11 |
| Rv2047c/- | (cc=0.8168) | info on Rv2047c/- |
| Rv1127c/ppdK | (cc=0.782) | info on Rv1127c/ppdK |
| Rv3501c/yrbE4A | (cc=0.6777) | info on Rv3501c/yrbE4A |
| Rv3495c/lprN | (cc=0.6732) | info on Rv3495c/lprN |
| Rv3500c/yrbE4B | (cc=0.664) | info on Rv3500c/yrbE4B |
| Rv3497c/mce4C | (cc=0.6377) | info on Rv3497c/mce4C |
| Rv3498c/mce4B | (cc=0.6299) | info on Rv3498c/mce4B |
| Rv3492c/- | (cc=0.6249) | info on Rv3492c/- |
| Rv3496c/mce4D | (cc=0.6243) | info on Rv3496c/mce4D |
Correlation of Rv2048c/pks12 with Rv2047c/-
Normalized LFCs for Rv2048c/pks12:
(description and provenance of datasets)
| Rv2048c/pks12 | Rv2047c/- | |
| Fe_supp_jason_reseq | 1.149 | 1.124 |
| low_pH_jason_reseq | 1.35 | 1.372 |
| NO_jason_reseq | -1.089 | -4.082 |
| B6_jason_reseq | -0.461 | -1.144 |
| MHCII_jason_reseq | -0.735 | -1.52 |
| Isoniazid02 | 0.135 | -0.851 |
| Rifampicin4 | 0.374 | -0.945 |
| Ethambutol3 | -0.153 | -0.575 |
| Meropenem3 | -0.422 | -0.056 |
| Vancomycin16 | 2.491 | 1.754 |
| Rv2680_day32 | -1.824 | -2.847 |
| H37Rv_KO_MarP | -0.43 | 0.179 |
| hypoxia_3wks | -0.407 | -0.973 |
| hypoxia_6wks | -0.069 | -1.894 |
| glycerol | -1.805 | -2.674 |
| cholesterol | -1.954 | -2.967 |
| AJ | -1.681 | -3.072 |
| Bibs02 | -0.682 | -0.958 |
| Bibs02c | -0.703 | -1.675 |
| BL6 | -0.376 | -0.817 |
| BL6a | -0.891 | -2.246 |
| BXD01 | -0.944 | -1.795 |
| BXD010 | -0.928 | -2.081 |
| BXD011 | -0.34 | -1.903 |
| BXD03 | -0.844 | -2.106 |
| BXD04 | -1.032 | -1.298 |
| BXD05 | -0.605 | -1.93 |
| BXD06 | -0.967 | -1.839 |
| BXD07 | -0.8 | -1.762 |
| BXD08 | -0.496 | -1.908 |
| BXD09 | -1.346 | -1.936 |
| CAST | -1.792 | -2.327 |
| CCcont | 0.659 | -0.114 |
| DS01 | -2.262 | -2.577 |
| DS02 | -2.229 | -2.88 |
| DS04 | -1.211 | -1.113 |
| DS0c | -1.354 | -3.111 |
| GP01 | 0.649 | 0.043 |
| GP02 | 0.872 | -0.943 |
| GP0c | 0.33 | -0.12 |
| NOD | -1.298 | -2.974 |
| NZO | -0.98 | -1.796 |
| PWK | -1.421 | -2.401 |
| H37Rv_KO_CtpC | -0.731 | -0.812 |
| H37Rv_KO_CtpD | -0.732 | -1.436 |
| H37Rv_KO_Rv1272 | -0.329 | -0.705 |
| H37Rv_KO_SugABC | -0.487 | -1.421 |
| H37Rv_KO_MbtN | 0.706 | 1.275 |
| Trans05 | 0.598 | -0.207 |
| macrophage_unactivated | -1.588 | -2.241 |
| IL1 | 2.429 | 2.091 |
| Rapamycin | 1.525 | 1.685 |
| Tcell | 0.0 | -0.857 |
| GMCSF | -3.034 | -3.599 |
| IFNab | -0.846 | -0.892 |
| IFNg | -1.451 | -1.783 |
| IFNg_GMCSF1 | -1.332 | -1.838 |
| Rv1432_day32 | -1.229 | -2.265 |
| Rv1565c_day32 | -1.529 | -1.783 |
| secA2_input | -0.704 | 0.102 |
| delta_Rv3594 | 0.193 | 0.555 |
| delta_Rv3717 | 0.097 | 0.154 |
| delta_Rv3811 | 0.222 | 0.046 |
| delta_Rv0954 | 0.163 | -0.194 |
| PonA1 | 0.624 | 0.669 |
| EccD1_KO | -0.845 | -1.286 |
| EspI_KO | -0.836 | -1.469 |
| PE35_KO | 0.636 | 0.767 |
| PPE68_KO | -0.096 | -0.176 |
| glycerol2 | -1.307 | 0.0 |
| lignocerate | -1.136 | 0.0 |
| oleate | -0.315 | 0.0 |
| phosphatidylcholine | -1.307 | 0.0 |
| acetate | -0.507 | 0.229 |
| glucAc | 0.135 | 1.034 |
| Rv0950ko | -0.416 | 0.112 |
| Rv1096ko | -0.416 | 0.0 |
| Rv3684ko | -0.845 | -0.511 |
| delta_otsA_trehalose | -0.311 | -0.199 |