Top 10 genes with highest correlation to Rv2048c/pks12:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0202c/mmpL11 | (cc=0.8539) | info on Rv0202c/mmpL11 |
| Rv2047c/- | (cc=0.8168) | info on Rv2047c/- |
| Rv1127c/ppdK | (cc=0.782) | info on Rv1127c/ppdK |
| Rv3501c/yrbE4A | (cc=0.6777) | info on Rv3501c/yrbE4A |
| Rv3495c/lprN | (cc=0.6732) | info on Rv3495c/lprN |
| Rv3500c/yrbE4B | (cc=0.664) | info on Rv3500c/yrbE4B |
| Rv3497c/mce4C | (cc=0.6377) | info on Rv3497c/mce4C |
| Rv3498c/mce4B | (cc=0.6299) | info on Rv3498c/mce4B |
| Rv3492c/- | (cc=0.6249) | info on Rv3492c/- |
| Rv3496c/mce4D | (cc=0.6243) | info on Rv3496c/mce4D |
Correlation of Rv2048c/pks12 with Rv3498c/mce4B
Normalized LFCs for Rv2048c/pks12:
(description and provenance of datasets)
| Rv2048c/pks12 | Rv3498c/mce4B | |
| Fe_supp_jason_reseq | 1.149 | 0.104 |
| low_pH_jason_reseq | 1.35 | 0.758 |
| NO_jason_reseq | -1.089 | 0.026 |
| B6_jason_reseq | -0.461 | -2.414 |
| MHCII_jason_reseq | -0.735 | -3.285 |
| Isoniazid02 | 0.135 | -0.307 |
| Rifampicin4 | 0.374 | 0.33 |
| Ethambutol3 | -0.153 | 0.236 |
| Meropenem3 | -0.422 | -0.93 |
| Vancomycin16 | 2.491 | 0.236 |
| Rv2680_day32 | -1.824 | -2.748 |
| H37Rv_KO_MarP | -0.43 | 0.864 |
| hypoxia_3wks | -0.407 | 0.518 |
| hypoxia_6wks | -0.069 | 0.34 |
| glycerol | -1.805 | -0.287 |
| cholesterol | -1.954 | -3.124 |
| AJ | -1.681 | -4.02 |
| Bibs02 | -0.682 | -0.621 |
| Bibs02c | -0.703 | -2.621 |
| BL6 | -0.376 | -0.086 |
| BL6a | -0.891 | -1.158 |
| BXD01 | -0.944 | -0.536 |
| BXD010 | -0.928 | -0.309 |
| BXD011 | -0.34 | -0.307 |
| BXD03 | -0.844 | -1.587 |
| BXD04 | -1.032 | -0.816 |
| BXD05 | -0.605 | -0.27 |
| BXD06 | -0.967 | -0.669 |
| BXD07 | -0.8 | 0.525 |
| BXD08 | -0.496 | -0.422 |
| BXD09 | -1.346 | -0.704 |
| CAST | -1.792 | -1.867 |
| CCcont | 0.659 | 0.737 |
| DS01 | -2.262 | -3.896 |
| DS02 | -2.229 | -2.978 |
| DS04 | -1.211 | -1.873 |
| DS0c | -1.354 | -2.545 |
| GP01 | 0.649 | 0.694 |
| GP02 | 0.872 | -0.603 |
| GP0c | 0.33 | 1.206 |
| NOD | -1.298 | -2.032 |
| NZO | -0.98 | -3.546 |
| PWK | -1.421 | -3.083 |
| H37Rv_KO_CtpC | -0.731 | -1.072 |
| H37Rv_KO_CtpD | -0.732 | 0.231 |
| H37Rv_KO_Rv1272 | -0.329 | -0.187 |
| H37Rv_KO_SugABC | -0.487 | 1.096 |
| H37Rv_KO_MbtN | 0.706 | 0.144 |
| Trans05 | 0.598 | -0.044 |
| macrophage_unactivated | -1.588 | -0.947 |
| IL1 | 2.429 | 1.91 |
| Rapamycin | 1.525 | 1.906 |
| Tcell | 0.0 | -0.388 |
| GMCSF | -3.034 | -1.748 |
| IFNab | -0.846 | -2.21 |
| IFNg | -1.451 | -0.909 |
| IFNg_GMCSF1 | -1.332 | -1.361 |
| Rv1432_day32 | -1.229 | -3.512 |
| Rv1565c_day32 | -1.529 | -3.77 |
| secA2_input | -0.704 | 0.064 |
| delta_Rv3594 | 0.193 | -0.128 |
| delta_Rv3717 | 0.097 | -0.096 |
| delta_Rv3811 | 0.222 | -0.522 |
| delta_Rv0954 | 0.163 | -0.654 |
| PonA1 | 0.624 | -0.735 |
| EccD1_KO | -0.845 | 0.881 |
| EspI_KO | -0.836 | 0.707 |
| PE35_KO | 0.636 | 0.683 |
| PPE68_KO | -0.096 | 1.113 |
| glycerol2 | -1.307 | -0.932 |
| lignocerate | -1.136 | 0.179 |
| oleate | -0.315 | 1.041 |
| phosphatidylcholine | -1.307 | -0.563 |
| acetate | -0.507 | -0.595 |
| glucAc | 0.135 | -0.676 |
| Rv0950ko | -0.416 | 0.157 |
| Rv1096ko | -0.416 | 0.537 |
| Rv3684ko | -0.845 | 0.54 |
| delta_otsA_trehalose | -0.311 | 0.817 |