Top 10 genes with highest correlation to Rv2040c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2274c/mazF8 | (cc=0.5681) | info on Rv2274c/mazF8 |
| Rv1954A/- | (cc=0.5504) | info on Rv1954A/- |
| Rv1430/PE16 | (cc=0.5072) | info on Rv1430/PE16 |
| Rv1980c/mpt64 | (cc=0.5032) | info on Rv1980c/mpt64 |
| Rv1561/vapC11 | (cc=0.5004) | info on Rv1561/vapC11 |
| Rv2500c/fadE19 | (cc=0.4949) | info on Rv2500c/fadE19 |
| Rv1526c/- | (cc=0.4938) | info on Rv1526c/- |
| Rv3669/- | (cc=0.4922) | info on Rv3669/- |
| Rv2481c/- | (cc=0.4885) | info on Rv2481c/- |
| Rv1896c/- | (cc=0.4875) | info on Rv1896c/- |
Correlation of Rv2040c/- with Rv3669/-
Normalized LFCs for Rv2040c/-:
(description and provenance of datasets)
| Rv2040c/- | Rv3669/- | |
| Fe_supp_jason_reseq | 0.032 | 2.087 |
| low_pH_jason_reseq | 0.291 | -0.811 |
| NO_jason_reseq | -0.399 | -1.273 |
| B6_jason_reseq | -0.415 | 1.973 |
| MHCII_jason_reseq | -1.451 | -0.474 |
| Isoniazid02 | -0.255 | 0.21 |
| Rifampicin4 | 0.252 | 0.912 |
| Ethambutol3 | -0.27 | 0.617 |
| Meropenem3 | -0.266 | -0.409 |
| Vancomycin16 | 0.247 | 0.0 |
| Rv2680_day32 | 0.687 | 0.0 |
| H37Rv_KO_MarP | -0.052 | -0.669 |
| hypoxia_3wks | 0.467 | 0.267 |
| hypoxia_6wks | -0.065 | 2.362 |
| glycerol | -0.23 | -1.463 |
| cholesterol | -0.378 | 0.528 |
| AJ | 0.513 | -1.487 |
| Bibs02 | -2.245 | -1.673 |
| Bibs02c | -1.391 | -1.914 |
| BL6 | 1.183 | 0.053 |
| BL6a | -0.03 | -0.088 |
| BXD01 | 0.84 | -0.64 |
| BXD010 | 0.656 | 0.956 |
| BXD011 | 2.53 | 1.714 |
| BXD03 | 0.755 | 0.92 |
| BXD04 | 0.091 | -0.372 |
| BXD05 | 0.598 | 0.682 |
| BXD06 | 0.328 | 1.131 |
| BXD07 | 0.042 | 1.2 |
| BXD08 | 0.118 | -0.4 |
| BXD09 | 0.87 | 1.787 |
| CAST | -0.425 | -0.21 |
| CCcont | 1.059 | 1.049 |
| DS01 | -1.131 | -0.216 |
| DS02 | -0.792 | -0.531 |
| DS04 | -0.468 | -1.775 |
| DS0c | -0.247 | -1.985 |
| GP01 | -0.601 | -0.903 |
| GP02 | -1.109 | -0.761 |
| GP0c | -0.865 | -1.19 |
| NOD | 0.76 | -0.099 |
| NZO | -0.727 | -0.38 |
| PWK | 0.06 | 0.388 |
| H37Rv_KO_CtpC | 0.567 | 2.166 |
| H37Rv_KO_CtpD | 0.039 | -1.159 |
| H37Rv_KO_Rv1272 | 1.84 | -1.29 |
| H37Rv_KO_SugABC | -0.918 | -0.906 |
| H37Rv_KO_MbtN | -0.421 | -0.31 |
| Trans05 | 1.52 | -0.947 |
| macrophage_unactivated | 0.325 | 0.088 |
| IL1 | 0.089 | 2.334 |
| Rapamycin | -0.046 | 0.252 |
| Tcell | 0.147 | 0.0 |
| GMCSF | 0.729 | 1.809 |
| IFNab | 0.091 | 2.228 |
| IFNg | -0.385 | 0.69 |
| IFNg_GMCSF1 | 0.826 | 2.369 |
| Rv1432_day32 | -0.415 | 0.0 |
| Rv1565c_day32 | -0.584 | 0.0 |
| secA2_input | -2.616 | -3.131 |
| delta_Rv3594 | 0.352 | 1.306 |
| delta_Rv3717 | 0.044 | 2.017 |
| delta_Rv3811 | 0.696 | 2.411 |
| delta_Rv0954 | -0.439 | -0.792 |
| PonA1 | 0.212 | 0.986 |
| EccD1_KO | 0.605 | 0.454 |
| EspI_KO | 0.727 | 2.852 |
| PE35_KO | 1.164 | 1.263 |
| PPE68_KO | 1.072 | 0.0 |
| glycerol2 | -0.273 | 0.0 |
| lignocerate | 0.012 | 0.32 |
| oleate | -0.597 | 0.0 |
| phosphatidylcholine | 0.193 | 0.0 |
| acetate | -0.032 | 1.998 |
| glucAc | 0.105 | 1.306 |
| Rv0950ko | -0.645 | -1.372 |
| Rv1096ko | -1.23 | -2.069 |
| Rv3684ko | -2.021 | -0.684 |
| delta_otsA_trehalose | -0.103 | -0.667 |