Top 10 genes with highest correlation to Rv2040c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2274c/mazF8 | (cc=0.5681) | info on Rv2274c/mazF8 |
Rv1954A/- | (cc=0.5504) | info on Rv1954A/- |
Rv1430/PE16 | (cc=0.5072) | info on Rv1430/PE16 |
Rv1980c/mpt64 | (cc=0.5032) | info on Rv1980c/mpt64 |
Rv1561/vapC11 | (cc=0.5004) | info on Rv1561/vapC11 |
Rv2500c/fadE19 | (cc=0.4949) | info on Rv2500c/fadE19 |
Rv1526c/- | (cc=0.4938) | info on Rv1526c/- |
Rv3669/- | (cc=0.4922) | info on Rv3669/- |
Rv2481c/- | (cc=0.4885) | info on Rv2481c/- |
Rv1896c/- | (cc=0.4875) | info on Rv1896c/- |
Correlation of Rv2040c/- with Rv1430/PE16
Normalized LFCs for Rv2040c/-:
(description and provenance of datasets)
Rv2040c/- | Rv1430/PE16 | |
Fe_supp_jason_reseq | 0.032 | 0.302 |
low_pH_jason_reseq | 0.291 | -0.125 |
NO_jason_reseq | -0.399 | 0.113 |
B6_jason_reseq | -0.415 | -0.171 |
MHCII_jason_reseq | -1.451 | 0.083 |
Isoniazid02 | -0.255 | -0.851 |
Rifampicin4 | 0.252 | -1.099 |
Ethambutol3 | -0.27 | -0.067 |
Meropenem3 | -0.266 | -0.836 |
Vancomycin16 | 0.247 | -0.74 |
Rv2680_day32 | 0.687 | -0.018 |
H37Rv_KO_MarP | -0.052 | -0.229 |
hypoxia_3wks | 0.467 | 0.69 |
hypoxia_6wks | -0.065 | 0.226 |
glycerol | -0.23 | 0.161 |
cholesterol | -0.378 | 0.209 |
AJ | 0.513 | 0.45 |
Bibs02 | -2.245 | -0.183 |
Bibs02c | -1.391 | -0.838 |
BL6 | 1.183 | 1.033 |
BL6a | -0.03 | 0.306 |
BXD01 | 0.84 | 0.813 |
BXD010 | 0.656 | 0.928 |
BXD011 | 2.53 | 0.727 |
BXD03 | 0.755 | 1.269 |
BXD04 | 0.091 | 1.496 |
BXD05 | 0.598 | 1.203 |
BXD06 | 0.328 | 0.868 |
BXD07 | 0.042 | 1.106 |
BXD08 | 0.118 | 1.299 |
BXD09 | 0.87 | 0.941 |
CAST | -0.425 | 0.47 |
CCcont | 1.059 | 0.585 |
DS01 | -1.131 | 0.216 |
DS02 | -0.792 | -0.52 |
DS04 | -0.468 | -0.046 |
DS0c | -0.247 | -0.363 |
GP01 | -0.601 | -1.111 |
GP02 | -1.109 | 0.305 |
GP0c | -0.865 | -0.218 |
NOD | 0.76 | 0.727 |
NZO | -0.727 | -0.225 |
PWK | 0.06 | 0.179 |
H37Rv_KO_CtpC | 0.567 | 0.47 |
H37Rv_KO_CtpD | 0.039 | 1.086 |
H37Rv_KO_Rv1272 | 1.84 | 0.988 |
H37Rv_KO_SugABC | -0.918 | -0.565 |
H37Rv_KO_MbtN | -0.421 | 0.0 |
Trans05 | 1.52 | 1.093 |
macrophage_unactivated | 0.325 | 0.764 |
IL1 | 0.089 | 0.667 |
Rapamycin | -0.046 | 0.509 |
Tcell | 0.147 | 0.512 |
GMCSF | 0.729 | 0.415 |
IFNab | 0.091 | 0.366 |
IFNg | -0.385 | 0.128 |
IFNg_GMCSF1 | 0.826 | 0.352 |
Rv1432_day32 | -0.415 | 0.216 |
Rv1565c_day32 | -0.584 | 0.398 |
secA2_input | -2.616 | -1.49 |
delta_Rv3594 | 0.352 | 0.324 |
delta_Rv3717 | 0.044 | -0.503 |
delta_Rv3811 | 0.696 | -0.265 |
delta_Rv0954 | -0.439 | 0.512 |
PonA1 | 0.212 | 0.182 |
EccD1_KO | 0.605 | 0.635 |
EspI_KO | 0.727 | 1.035 |
PE35_KO | 1.164 | 0.356 |
PPE68_KO | 1.072 | 0.435 |
glycerol2 | -0.273 | 0.163 |
lignocerate | 0.012 | -0.105 |
oleate | -0.597 | 0.79 |
phosphatidylcholine | 0.193 | 0.38 |
acetate | -0.032 | -0.16 |
glucAc | 0.105 | -0.879 |
Rv0950ko | -0.645 | 0.407 |
Rv1096ko | -1.23 | 0.446 |
Rv3684ko | -2.021 | 0.092 |
delta_otsA_trehalose | -0.103 | -0.383 |