Top 10 genes with highest correlation to Rv2040c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2274c/mazF8 | (cc=0.5681) | info on Rv2274c/mazF8 |
| Rv1954A/- | (cc=0.5504) | info on Rv1954A/- |
| Rv1430/PE16 | (cc=0.5072) | info on Rv1430/PE16 |
| Rv1980c/mpt64 | (cc=0.5032) | info on Rv1980c/mpt64 |
| Rv1561/vapC11 | (cc=0.5004) | info on Rv1561/vapC11 |
| Rv2500c/fadE19 | (cc=0.4949) | info on Rv2500c/fadE19 |
| Rv1526c/- | (cc=0.4938) | info on Rv1526c/- |
| Rv3669/- | (cc=0.4922) | info on Rv3669/- |
| Rv2481c/- | (cc=0.4885) | info on Rv2481c/- |
| Rv1896c/- | (cc=0.4875) | info on Rv1896c/- |
Correlation of Rv2040c/- with Rv2274c/mazF8
Normalized LFCs for Rv2040c/-:
(description and provenance of datasets)
| Rv2040c/- | Rv2274c/mazF8 | |
| Fe_supp_jason_reseq | 0.032 | -1.392 |
| low_pH_jason_reseq | 0.291 | -1.832 |
| NO_jason_reseq | -0.399 | -0.165 |
| B6_jason_reseq | -0.415 | -1.492 |
| MHCII_jason_reseq | -1.451 | -2.047 |
| Isoniazid02 | -0.255 | -0.026 |
| Rifampicin4 | 0.252 | -0.309 |
| Ethambutol3 | -0.27 | -0.454 |
| Meropenem3 | -0.266 | -0.447 |
| Vancomycin16 | 0.247 | -0.048 |
| Rv2680_day32 | 0.687 | 1.226 |
| H37Rv_KO_MarP | -0.052 | 0.825 |
| hypoxia_3wks | 0.467 | 0.291 |
| hypoxia_6wks | -0.065 | 1.211 |
| glycerol | -0.23 | -0.483 |
| cholesterol | -0.378 | -0.107 |
| AJ | 0.513 | 1.16 |
| Bibs02 | -2.245 | -0.934 |
| Bibs02c | -1.391 | -0.379 |
| BL6 | 1.183 | 1.256 |
| BL6a | -0.03 | 0.839 |
| BXD01 | 0.84 | 1.272 |
| BXD010 | 0.656 | -0.161 |
| BXD011 | 2.53 | 0.967 |
| BXD03 | 0.755 | 1.797 |
| BXD04 | 0.091 | 2.593 |
| BXD05 | 0.598 | 1.491 |
| BXD06 | 0.328 | 0.967 |
| BXD07 | 0.042 | 0.865 |
| BXD08 | 0.118 | 2.262 |
| BXD09 | 0.87 | 1.051 |
| CAST | -0.425 | 1.218 |
| CCcont | 1.059 | 1.134 |
| DS01 | -1.131 | -0.428 |
| DS02 | -0.792 | -1.475 |
| DS04 | -0.468 | 0.218 |
| DS0c | -0.247 | 0.05 |
| GP01 | -0.601 | -1.43 |
| GP02 | -1.109 | -1.289 |
| GP0c | -0.865 | -1.463 |
| NOD | 0.76 | 0.607 |
| NZO | -0.727 | 1.348 |
| PWK | 0.06 | 0.045 |
| H37Rv_KO_CtpC | 0.567 | 1.118 |
| H37Rv_KO_CtpD | 0.039 | -0.507 |
| H37Rv_KO_Rv1272 | 1.84 | 0.862 |
| H37Rv_KO_SugABC | -0.918 | -0.926 |
| H37Rv_KO_MbtN | -0.421 | 0.782 |
| Trans05 | 1.52 | 1.324 |
| macrophage_unactivated | 0.325 | 1.667 |
| IL1 | 0.089 | 1.735 |
| Rapamycin | -0.046 | -0.353 |
| Tcell | 0.147 | 2.141 |
| GMCSF | 0.729 | 0.071 |
| IFNab | 0.091 | 0.55 |
| IFNg | -0.385 | 0.072 |
| IFNg_GMCSF1 | 0.826 | 0.336 |
| Rv1432_day32 | -0.415 | 0.0 |
| Rv1565c_day32 | -0.584 | 1.308 |
| secA2_input | -2.616 | -1.545 |
| delta_Rv3594 | 0.352 | 0.977 |
| delta_Rv3717 | 0.044 | 1.223 |
| delta_Rv3811 | 0.696 | -0.564 |
| delta_Rv0954 | -0.439 | 0.473 |
| PonA1 | 0.212 | -0.278 |
| EccD1_KO | 0.605 | 0.802 |
| EspI_KO | 0.727 | 0.0 |
| PE35_KO | 1.164 | 0.545 |
| PPE68_KO | 1.072 | 0.899 |
| glycerol2 | -0.273 | -0.242 |
| lignocerate | 0.012 | -0.279 |
| oleate | -0.597 | 0.5 |
| phosphatidylcholine | 0.193 | 0.164 |
| acetate | -0.032 | -0.243 |
| glucAc | 0.105 | -0.237 |
| Rv0950ko | -0.645 | -1.821 |
| Rv1096ko | -1.23 | -2.376 |
| Rv3684ko | -2.021 | -1.978 |
| delta_otsA_trehalose | -0.103 | -0.854 |