Top 10 genes with highest correlation to Rv2036/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2328/PE23 | (cc=0.533) | info on Rv2328/PE23 |
| Rv1734c/- | (cc=0.5211) | info on Rv1734c/- |
| Rv3170/aofH | (cc=0.5095) | info on Rv3170/aofH |
| Rv0687/- | (cc=0.5059) | info on Rv0687/- |
| Rv1963c/mce3R | (cc=0.5023) | info on Rv1963c/mce3R |
| Rv0433/- | (cc=0.5008) | info on Rv0433/- |
| Rv2014/- | (cc=0.4998) | info on Rv2014/- |
| Rv0571c/- | (cc=0.4983) | info on Rv0571c/- |
| Rv1956/higA | (cc=0.496) | info on Rv1956/higA |
| Rv1973/- | (cc=0.4941) | info on Rv1973/- |
Correlation of Rv2036/- with Rv0433/-
Normalized LFCs for Rv2036/-:
(description and provenance of datasets)
| Rv2036/- | Rv0433/- | |
| Fe_supp_jason_reseq | -0.549 | -0.808 |
| low_pH_jason_reseq | -0.179 | 0.604 |
| NO_jason_reseq | -0.914 | 0.977 |
| B6_jason_reseq | 0.759 | 0.47 |
| MHCII_jason_reseq | 0.789 | 0.222 |
| Isoniazid02 | -0.627 | 0.29 |
| Rifampicin4 | 1.186 | 0.022 |
| Ethambutol3 | -0.343 | 1.661 |
| Meropenem3 | 0.159 | 0.376 |
| Vancomycin16 | 0.297 | 0.218 |
| Rv2680_day32 | -1.564 | 0.04 |
| H37Rv_KO_MarP | -0.157 | 0.0 |
| hypoxia_3wks | 0.0 | -0.084 |
| hypoxia_6wks | 0.0 | 0.33 |
| glycerol | -2.266 | -0.557 |
| cholesterol | -1.742 | 1.309 |
| AJ | 0.595 | -0.899 |
| Bibs02 | 1.636 | -1.151 |
| Bibs02c | -3.116 | -1.075 |
| BL6 | -2.702 | -1.407 |
| BL6a | -2.646 | -1.629 |
| BXD01 | -2.091 | -1.696 |
| BXD010 | -1.21 | -1.654 |
| BXD011 | -2.212 | -1.023 |
| BXD03 | -2.663 | -1.521 |
| BXD04 | -1.168 | -1.371 |
| BXD05 | -0.484 | -0.869 |
| BXD06 | -1.783 | -1.49 |
| BXD07 | -1.021 | -0.887 |
| BXD08 | -2.22 | -1.173 |
| BXD09 | -1.877 | -1.4 |
| CAST | -1.408 | -0.409 |
| CCcont | -2.593 | -2.189 |
| DS01 | -0.298 | -1.104 |
| DS02 | 0.057 | -0.692 |
| DS04 | -2.999 | -1.57 |
| DS0c | -0.148 | -1.436 |
| GP01 | -1.229 | 0.048 |
| GP02 | -1.797 | -1.419 |
| GP0c | -1.936 | -1.485 |
| NOD | -0.283 | -0.163 |
| NZO | -0.406 | -0.968 |
| PWK | -0.705 | -0.72 |
| H37Rv_KO_CtpC | -1.113 | -1.254 |
| H37Rv_KO_CtpD | -2.29 | -0.007 |
| H37Rv_KO_Rv1272 | -0.765 | -0.411 |
| H37Rv_KO_SugABC | -1.791 | -0.401 |
| H37Rv_KO_MbtN | 0.601 | -0.052 |
| Trans05 | -0.422 | -0.683 |
| macrophage_unactivated | -1.708 | -1.632 |
| IL1 | -2.231 | -0.039 |
| Rapamycin | -3.069 | -1.267 |
| Tcell | -1.551 | -0.407 |
| GMCSF | -0.51 | -0.613 |
| IFNab | -0.907 | -0.42 |
| IFNg | -1.109 | -0.208 |
| IFNg_GMCSF1 | -0.77 | -0.245 |
| Rv1432_day32 | -0.43 | -0.464 |
| Rv1565c_day32 | 0.0 | -0.041 |
| secA2_input | -1.498 | 0.089 |
| delta_Rv3594 | 2.839 | 0.864 |
| delta_Rv3717 | 2.382 | 0.893 |
| delta_Rv3811 | 2.552 | 0.763 |
| delta_Rv0954 | 0.249 | 1.151 |
| PonA1 | -1.235 | 0.72 |
| EccD1_KO | -1.033 | -0.931 |
| EspI_KO | -0.787 | -0.505 |
| PE35_KO | -0.093 | -1.105 |
| PPE68_KO | -0.419 | -0.541 |
| glycerol2 | -0.95 | -0.261 |
| lignocerate | -0.826 | -0.054 |
| oleate | -0.767 | 0.427 |
| phosphatidylcholine | -0.758 | 0.714 |
| acetate | -0.499 | -0.366 |
| glucAc | 0.333 | -0.539 |
| Rv0950ko | 0.0 | -0.096 |
| Rv1096ko | -1.855 | -0.223 |
| Rv3684ko | -1.588 | 0.305 |
| delta_otsA_trehalose | 0.208 | -0.056 |