Top 10 genes with highest correlation to Rv2032/acg:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0846c/- | (cc=0.6387) | info on Rv0846c/- |
| Rv1453/- | (cc=0.6307) | info on Rv1453/- |
| Rv2636/- | (cc=0.6246) | info on Rv2636/- |
| Rv1180/pks3 | (cc=0.6063) | info on Rv1180/pks3 |
| Rv0228/- | (cc=0.5965) | info on Rv0228/- |
| Rv1181/pks4 | (cc=0.5561) | info on Rv1181/pks4 |
| Rv3295/- | (cc=0.5463) | info on Rv3295/- |
| Rv0006/gyrA | (cc=0.5459) | info on Rv0006/gyrA |
| Rv2687c/- | (cc=0.5359) | info on Rv2687c/- |
| Rv0136/cyp138 | (cc=0.5355) | info on Rv0136/cyp138 |
Correlation of Rv2032/acg with Rv2636/-
Normalized LFCs for Rv2032/acg:
(description and provenance of datasets)
| Rv2032/acg | Rv2636/- | |
| Fe_supp_jason_reseq | -0.469 | -0.073 |
| low_pH_jason_reseq | 0.0 | -0.942 |
| NO_jason_reseq | -0.57 | 0.071 |
| B6_jason_reseq | 2.379 | 1.243 |
| MHCII_jason_reseq | 2.236 | 1.783 |
| Isoniazid02 | -0.064 | -0.55 |
| Rifampicin4 | -0.06 | 0.162 |
| Ethambutol3 | 0.613 | 0.417 |
| Meropenem3 | 0.025 | -1.06 |
| Vancomycin16 | -0.117 | -0.642 |
| Rv2680_day32 | 0.257 | 1.092 |
| H37Rv_KO_MarP | 0.399 | 0.013 |
| hypoxia_3wks | 3.752 | 0.056 |
| hypoxia_6wks | 1.817 | -0.186 |
| glycerol | -1.296 | 0.263 |
| cholesterol | -0.834 | 0.048 |
| AJ | -0.131 | 0.345 |
| Bibs02 | 0.457 | 0.177 |
| Bibs02c | -0.026 | 0.358 |
| BL6 | -0.581 | -0.987 |
| BL6a | -0.604 | -0.442 |
| BXD01 | -1.228 | -1.222 |
| BXD010 | -1.266 | -0.989 |
| BXD011 | -1.107 | -1.507 |
| BXD03 | -0.963 | -1.037 |
| BXD04 | -0.991 | -1.588 |
| BXD05 | -1.374 | -0.968 |
| BXD06 | -1.278 | -1.495 |
| BXD07 | -1.165 | -1.077 |
| BXD08 | -1.595 | -0.781 |
| BXD09 | -1.126 | -1.87 |
| CAST | -0.484 | 0.174 |
| CCcont | -1.407 | -1.767 |
| DS01 | -0.245 | 0.399 |
| DS02 | -0.377 | 0.578 |
| DS04 | -0.528 | -0.409 |
| DS0c | -1.136 | 0.083 |
| GP01 | -0.537 | -0.456 |
| GP02 | -1.326 | -0.744 |
| GP0c | -1.559 | -0.677 |
| NOD | -0.74 | 0.574 |
| NZO | 0.165 | 0.126 |
| PWK | 0.344 | -0.057 |
| H37Rv_KO_CtpC | -2.219 | -1.77 |
| H37Rv_KO_CtpD | -1.594 | -0.581 |
| H37Rv_KO_Rv1272 | -0.027 | -1.089 |
| H37Rv_KO_SugABC | -2.514 | -1.719 |
| H37Rv_KO_MbtN | -0.685 | -0.848 |
| Trans05 | -0.795 | -0.088 |
| macrophage_unactivated | -1.471 | -0.653 |
| IL1 | -0.854 | -0.445 |
| Rapamycin | -1.43 | -0.546 |
| Tcell | -0.994 | -0.867 |
| GMCSF | -0.301 | -0.446 |
| IFNab | -1.527 | -1.155 |
| IFNg | -0.468 | -0.136 |
| IFNg_GMCSF1 | -0.044 | -0.079 |
| Rv1432_day32 | -0.136 | -0.16 |
| Rv1565c_day32 | -0.346 | 0.062 |
| secA2_input | 1.871 | 1.133 |
| delta_Rv3594 | 0.288 | -0.601 |
| delta_Rv3717 | -0.131 | -0.271 |
| delta_Rv3811 | 0.28 | -0.458 |
| delta_Rv0954 | -0.309 | 0.151 |
| PonA1 | -1.3 | -0.324 |
| EccD1_KO | 0.395 | -0.151 |
| EspI_KO | 0.088 | 0.271 |
| PE35_KO | 0.674 | -0.079 |
| PPE68_KO | 0.195 | -0.266 |
| glycerol2 | -0.572 | 0.534 |
| lignocerate | -0.099 | 0.498 |
| oleate | -0.367 | 0.303 |
| phosphatidylcholine | -0.298 | 0.709 |
| acetate | 0.731 | 0.156 |
| glucAc | -0.084 | 0.155 |
| Rv0950ko | -1.007 | -0.027 |
| Rv1096ko | 0.22 | -0.25 |
| Rv3684ko | -0.517 | -0.662 |
| delta_otsA_trehalose | 0.861 | 0.719 |