Top 10 genes with highest correlation to Rv2032/acg:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0846c/- | (cc=0.6387) | info on Rv0846c/- |
| Rv1453/- | (cc=0.6307) | info on Rv1453/- |
| Rv2636/- | (cc=0.6246) | info on Rv2636/- |
| Rv1180/pks3 | (cc=0.6063) | info on Rv1180/pks3 |
| Rv0228/- | (cc=0.5965) | info on Rv0228/- |
| Rv1181/pks4 | (cc=0.5561) | info on Rv1181/pks4 |
| Rv3295/- | (cc=0.5463) | info on Rv3295/- |
| Rv0006/gyrA | (cc=0.5459) | info on Rv0006/gyrA |
| Rv2687c/- | (cc=0.5359) | info on Rv2687c/- |
| Rv0136/cyp138 | (cc=0.5355) | info on Rv0136/cyp138 |
Correlation of Rv2032/acg with Rv1180/pks3
Normalized LFCs for Rv2032/acg:
(description and provenance of datasets)
| Rv2032/acg | Rv1180/pks3 | |
| Fe_supp_jason_reseq | -0.469 | -0.279 |
| low_pH_jason_reseq | 0.0 | 2.652 |
| NO_jason_reseq | -0.57 | 0.0 |
| B6_jason_reseq | 2.379 | 2.843 |
| MHCII_jason_reseq | 2.236 | 3.318 |
| Isoniazid02 | -0.064 | -0.345 |
| Rifampicin4 | -0.06 | -0.374 |
| Ethambutol3 | 0.613 | 0.176 |
| Meropenem3 | 0.025 | -0.865 |
| Vancomycin16 | -0.117 | 0.225 |
| Rv2680_day32 | 0.257 | -0.493 |
| H37Rv_KO_MarP | 0.399 | 0.415 |
| hypoxia_3wks | 3.752 | -0.319 |
| hypoxia_6wks | 1.817 | 0.234 |
| glycerol | -1.296 | -0.016 |
| cholesterol | -0.834 | 0.163 |
| AJ | -0.131 | 0.356 |
| Bibs02 | 0.457 | -0.254 |
| Bibs02c | -0.026 | 0.646 |
| BL6 | -0.581 | -2.892 |
| BL6a | -0.604 | -0.405 |
| BXD01 | -1.228 | -2.644 |
| BXD010 | -1.266 | -1.603 |
| BXD011 | -1.107 | -2.421 |
| BXD03 | -0.963 | -1.964 |
| BXD04 | -0.991 | -1.702 |
| BXD05 | -1.374 | -1.519 |
| BXD06 | -1.278 | -2.271 |
| BXD07 | -1.165 | -2.302 |
| BXD08 | -1.595 | -2.404 |
| BXD09 | -1.126 | -2.206 |
| CAST | -0.484 | 0.307 |
| CCcont | -1.407 | -2.242 |
| DS01 | -0.245 | 0.371 |
| DS02 | -0.377 | 0.298 |
| DS04 | -0.528 | 0.292 |
| DS0c | -1.136 | 0.093 |
| GP01 | -0.537 | -1.877 |
| GP02 | -1.326 | -1.623 |
| GP0c | -1.559 | -3.264 |
| NOD | -0.74 | -0.194 |
| NZO | 0.165 | 0.069 |
| PWK | 0.344 | 0.374 |
| H37Rv_KO_CtpC | -2.219 | -1.492 |
| H37Rv_KO_CtpD | -1.594 | -2.799 |
| H37Rv_KO_Rv1272 | -0.027 | -2.581 |
| H37Rv_KO_SugABC | -2.514 | -1.747 |
| H37Rv_KO_MbtN | -0.685 | -1.345 |
| Trans05 | -0.795 | -1.761 |
| macrophage_unactivated | -1.471 | -3.27 |
| IL1 | -0.854 | -2.174 |
| Rapamycin | -1.43 | -1.534 |
| Tcell | -0.994 | -3.454 |
| GMCSF | -0.301 | -2.609 |
| IFNab | -1.527 | -2.276 |
| IFNg | -0.468 | -3.175 |
| IFNg_GMCSF1 | -0.044 | -1.518 |
| Rv1432_day32 | -0.136 | 0.411 |
| Rv1565c_day32 | -0.346 | 0.692 |
| secA2_input | 1.871 | 0.944 |
| delta_Rv3594 | 0.288 | 0.2 |
| delta_Rv3717 | -0.131 | -1.016 |
| delta_Rv3811 | 0.28 | -1.142 |
| delta_Rv0954 | -0.309 | -1.262 |
| PonA1 | -1.3 | 0.077 |
| EccD1_KO | 0.395 | 1.457 |
| EspI_KO | 0.088 | -0.106 |
| PE35_KO | 0.674 | 0.694 |
| PPE68_KO | 0.195 | 0.557 |
| glycerol2 | -0.572 | -0.684 |
| lignocerate | -0.099 | 0.737 |
| oleate | -0.367 | -0.489 |
| phosphatidylcholine | -0.298 | -0.066 |
| acetate | 0.731 | -0.299 |
| glucAc | -0.084 | -0.016 |
| Rv0950ko | -1.007 | 1.227 |
| Rv1096ko | 0.22 | 0.826 |
| Rv3684ko | -0.517 | 0.419 |
| delta_otsA_trehalose | 0.861 | 0.724 |