Top 10 genes with highest correlation to Rv2032/acg:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0846c/- | (cc=0.6387) | info on Rv0846c/- |
| Rv1453/- | (cc=0.6307) | info on Rv1453/- |
| Rv2636/- | (cc=0.6246) | info on Rv2636/- |
| Rv1180/pks3 | (cc=0.6063) | info on Rv1180/pks3 |
| Rv0228/- | (cc=0.5965) | info on Rv0228/- |
| Rv1181/pks4 | (cc=0.5561) | info on Rv1181/pks4 |
| Rv3295/- | (cc=0.5463) | info on Rv3295/- |
| Rv0006/gyrA | (cc=0.5459) | info on Rv0006/gyrA |
| Rv2687c/- | (cc=0.5359) | info on Rv2687c/- |
| Rv0136/cyp138 | (cc=0.5355) | info on Rv0136/cyp138 |
Correlation of Rv2032/acg with Rv0228/-
Normalized LFCs for Rv2032/acg:
(description and provenance of datasets)
| Rv2032/acg | Rv0228/- | |
| Fe_supp_jason_reseq | -0.469 | 1.07 |
| low_pH_jason_reseq | 0.0 | 0.0 |
| NO_jason_reseq | -0.57 | 0.0 |
| B6_jason_reseq | 2.379 | 1.759 |
| MHCII_jason_reseq | 2.236 | 0.37 |
| Isoniazid02 | -0.064 | -0.167 |
| Rifampicin4 | -0.06 | 0.558 |
| Ethambutol3 | 0.613 | -0.14 |
| Meropenem3 | 0.025 | 0.128 |
| Vancomycin16 | -0.117 | 0.796 |
| Rv2680_day32 | 0.257 | 0.0 |
| H37Rv_KO_MarP | 0.399 | -0.684 |
| hypoxia_3wks | 3.752 | 0.678 |
| hypoxia_6wks | 1.817 | -0.626 |
| glycerol | -1.296 | 0.585 |
| cholesterol | -0.834 | 0.915 |
| AJ | -0.131 | 0.05 |
| Bibs02 | 0.457 | 0.56 |
| Bibs02c | -0.026 | -1.66 |
| BL6 | -0.581 | -2.023 |
| BL6a | -0.604 | -2.66 |
| BXD01 | -1.228 | -2.107 |
| BXD010 | -1.266 | -2.072 |
| BXD011 | -1.107 | -2.06 |
| BXD03 | -0.963 | -2.187 |
| BXD04 | -0.991 | -2.0 |
| BXD05 | -1.374 | -2.177 |
| BXD06 | -1.278 | -2.159 |
| BXD07 | -1.165 | -2.24 |
| BXD08 | -1.595 | -2.151 |
| BXD09 | -1.126 | -2.273 |
| CAST | -0.484 | -0.389 |
| CCcont | -1.407 | -2.131 |
| DS01 | -0.245 | -0.727 |
| DS02 | -0.377 | -1.942 |
| DS04 | -0.528 | 0.779 |
| DS0c | -1.136 | -1.431 |
| GP01 | -0.537 | -1.597 |
| GP02 | -1.326 | -1.346 |
| GP0c | -1.559 | -2.103 |
| NOD | -0.74 | -0.83 |
| NZO | 0.165 | -0.285 |
| PWK | 0.344 | 0.168 |
| H37Rv_KO_CtpC | -2.219 | -2.628 |
| H37Rv_KO_CtpD | -1.594 | -1.922 |
| H37Rv_KO_Rv1272 | -0.027 | -2.281 |
| H37Rv_KO_SugABC | -2.514 | -1.503 |
| H37Rv_KO_MbtN | -0.685 | -1.667 |
| Trans05 | -0.795 | -1.983 |
| macrophage_unactivated | -1.471 | -2.923 |
| IL1 | -0.854 | -2.747 |
| Rapamycin | -1.43 | -2.842 |
| Tcell | -0.994 | -3.017 |
| GMCSF | -0.301 | -2.445 |
| IFNab | -1.527 | -2.799 |
| IFNg | -0.468 | -2.475 |
| IFNg_GMCSF1 | -0.044 | -1.386 |
| Rv1432_day32 | -0.136 | 0.0 |
| Rv1565c_day32 | -0.346 | 0.0 |
| secA2_input | 1.871 | 1.565 |
| delta_Rv3594 | 0.288 | 0.402 |
| delta_Rv3717 | -0.131 | 0.0 |
| delta_Rv3811 | 0.28 | 0.205 |
| delta_Rv0954 | -0.309 | 0.0 |
| PonA1 | -1.3 | 0.0 |
| EccD1_KO | 0.395 | -0.865 |
| EspI_KO | 0.088 | -0.359 |
| PE35_KO | 0.674 | -0.368 |
| PPE68_KO | 0.195 | -0.841 |
| glycerol2 | -0.572 | 0.0 |
| lignocerate | -0.099 | 0.591 |
| oleate | -0.367 | 0.0 |
| phosphatidylcholine | -0.298 | 0.193 |
| acetate | 0.731 | 0.0 |
| glucAc | -0.084 | 0.0 |
| Rv0950ko | -1.007 | 0.793 |
| Rv1096ko | 0.22 | 1.143 |
| Rv3684ko | -0.517 | 0.452 |
| delta_otsA_trehalose | 0.861 | 0.0 |