Top 10 genes with highest correlation to Rv1982A/vapB36:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1806/PE20 | (cc=0.5115) | info on Rv1806/PE20 |
| Rv2966c/- | (cc=0.4529) | info on Rv2966c/- |
| Rv0150c/- | (cc=0.4494) | info on Rv0150c/- |
| Rv3392c/cmaA1 | (cc=0.4465) | info on Rv3392c/cmaA1 |
| Rv2366c/- | (cc=0.4448) | info on Rv2366c/- |
| Rv2270/lppN | (cc=0.4241) | info on Rv2270/lppN |
| Rv2213/pepB | (cc=0.4236) | info on Rv2213/pepB |
| Rv1003/- | (cc=0.4221) | info on Rv1003/- |
| Rv1079/metB | (cc=0.411) | info on Rv1079/metB |
| Rv0553/menC | (cc=0.408) | info on Rv0553/menC |
Correlation of Rv1982A/vapB36 with Rv3392c/cmaA1
Normalized LFCs for Rv1982A/vapB36:
(description and provenance of datasets)
| Rv1982A/vapB36 | Rv3392c/cmaA1 | |
| Fe_supp_jason_reseq | -0.066 | 0.373 |
| low_pH_jason_reseq | -0.338 | 0.783 |
| NO_jason_reseq | -1.221 | -1.748 |
| B6_jason_reseq | -0.334 | 0.085 |
| MHCII_jason_reseq | -2.353 | 1.089 |
| Isoniazid02 | -0.112 | 0.054 |
| Rifampicin4 | 0.322 | -0.772 |
| Ethambutol3 | -0.652 | -0.14 |
| Meropenem3 | -0.156 | 0.086 |
| Vancomycin16 | 0.0 | 0.329 |
| Rv2680_day32 | -0.476 | -0.365 |
| H37Rv_KO_MarP | -0.219 | 0.689 |
| hypoxia_3wks | -0.929 | 0.319 |
| hypoxia_6wks | 0.299 | 1.244 |
| glycerol | 0.149 | 0.844 |
| cholesterol | 1.618 | 0.07 |
| AJ | -0.896 | 0.726 |
| Bibs02 | -3.315 | -1.179 |
| Bibs02c | 1.685 | 0.55 |
| BL6 | -0.456 | -0.731 |
| BL6a | 1.175 | 0.936 |
| BXD01 | -0.793 | 0.309 |
| BXD010 | 0.644 | -0.206 |
| BXD011 | -1.698 | 0.742 |
| BXD03 | -0.786 | 0.227 |
| BXD04 | -0.623 | 0.208 |
| BXD05 | 0.81 | 1.133 |
| BXD06 | -0.926 | 0.482 |
| BXD07 | -0.065 | 0.725 |
| BXD08 | -0.884 | 0.656 |
| BXD09 | -0.452 | 0.387 |
| CAST | -0.889 | -0.462 |
| CCcont | -1.761 | -0.633 |
| DS01 | -2.676 | 1.237 |
| DS02 | -2.017 | 1.267 |
| DS04 | -0.358 | -0.167 |
| DS0c | 0.251 | 0.484 |
| GP01 | -1.707 | -1.899 |
| GP02 | -0.87 | -0.955 |
| GP0c | -2.054 | -1.78 |
| NOD | -0.97 | 0.532 |
| NZO | -0.727 | -0.481 |
| PWK | -0.223 | 1.124 |
| H37Rv_KO_CtpC | -0.859 | 0.625 |
| H37Rv_KO_CtpD | -1.915 | 0.853 |
| H37Rv_KO_Rv1272 | -1.663 | -0.745 |
| H37Rv_KO_SugABC | 0.517 | 0.984 |
| H37Rv_KO_MbtN | 0.547 | 1.266 |
| Trans05 | 0.996 | 0.456 |
| macrophage_unactivated | 0.0 | -0.051 |
| IL1 | -3.776 | 0.181 |
| Rapamycin | 0.365 | 0.0 |
| Tcell | -1.518 | -0.264 |
| GMCSF | -1.611 | 0.784 |
| IFNab | 0.496 | 0.78 |
| IFNg | 0.556 | -0.444 |
| IFNg_GMCSF1 | -0.496 | -0.578 |
| Rv1432_day32 | -1.918 | 0.394 |
| Rv1565c_day32 | 0.0 | -0.283 |
| secA2_input | -0.412 | 0.85 |
| delta_Rv3594 | 3.292 | 2.022 |
| delta_Rv3717 | 0.365 | 2.085 |
| delta_Rv3811 | 1.603 | 2.411 |
| delta_Rv0954 | 1.942 | 2.335 |
| PonA1 | -0.979 | 1.021 |
| EccD1_KO | 0.937 | 0.47 |
| EspI_KO | 0.359 | 1.075 |
| PE35_KO | -0.753 | 0.61 |
| PPE68_KO | 0.166 | 1.206 |
| glycerol2 | -2.221 | -0.474 |
| lignocerate | -1.846 | -0.363 |
| oleate | -1.723 | 0.0 |
| phosphatidylcholine | -1.86 | -0.21 |
| acetate | -1.887 | -0.027 |
| glucAc | -2.207 | -1.118 |
| Rv0950ko | -0.081 | 0.763 |
| Rv1096ko | -0.808 | 0.712 |
| Rv3684ko | 0.344 | 1.094 |
| delta_otsA_trehalose | 0.807 | -0.239 |