Top 10 genes with highest correlation to Rv1924c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3842c/glpQ1 | (cc=0.6629) | info on Rv3842c/glpQ1 |
| Rv1387/PPE20 | (cc=0.6073) | info on Rv1387/PPE20 |
| Rv1683/- | (cc=0.5816) | info on Rv1683/- |
| Rv0645c/mmaA1 | (cc=0.5762) | info on Rv0645c/mmaA1 |
| Rv3263/- | (cc=0.5576) | info on Rv3263/- |
| Rv1925/fadD31 | (cc=0.5344) | info on Rv1925/fadD31 |
| Rv1779c/- | (cc=0.5332) | info on Rv1779c/- |
| Rv0930/pstA1 | (cc=0.5168) | info on Rv0930/pstA1 |
| Rv0181c/- | (cc=0.5135) | info on Rv0181c/- |
| Rv0818/- | (cc=0.5048) | info on Rv0818/- |
Correlation of Rv1924c/- with Rv1925/fadD31
Normalized LFCs for Rv1924c/-:
(description and provenance of datasets)
| Rv1924c/- | Rv1925/fadD31 | |
| Fe_supp_jason_reseq | -1.916 | 1.332 |
| low_pH_jason_reseq | 0.249 | 1.553 |
| NO_jason_reseq | 1.373 | 0.291 |
| B6_jason_reseq | 1.172 | 2.287 |
| MHCII_jason_reseq | 0.727 | 0.401 |
| Isoniazid02 | -0.06 | -0.943 |
| Rifampicin4 | 0.287 | -2.166 |
| Ethambutol3 | 0.083 | -0.22 |
| Meropenem3 | 0.904 | -0.709 |
| Vancomycin16 | 0.257 | -5.027 |
| Rv2680_day32 | -0.359 | 1.518 |
| H37Rv_KO_MarP | 0.102 | 0.454 |
| hypoxia_3wks | -1.244 | -3.246 |
| hypoxia_6wks | -0.693 | 1.942 |
| glycerol | -0.345 | 0.875 |
| cholesterol | -0.674 | 0.805 |
| AJ | 1.254 | 0.555 |
| Bibs02 | 1.081 | 0.619 |
| Bibs02c | -0.371 | 0.762 |
| BL6 | 0.979 | 2.426 |
| BL6a | 0.868 | 3.626 |
| BXD01 | 1.062 | 3.932 |
| BXD010 | 1.025 | 3.693 |
| BXD011 | 2.165 | 5.692 |
| BXD03 | 0.856 | 2.496 |
| BXD04 | 1.44 | 4.113 |
| BXD05 | 1.857 | 3.297 |
| BXD06 | 2.334 | 4.596 |
| BXD07 | 1.717 | 4.152 |
| BXD08 | 0.799 | 4.38 |
| BXD09 | 1.228 | 4.226 |
| CAST | 0.455 | 1.168 |
| CCcont | -0.597 | 0.689 |
| DS01 | -0.079 | 0.773 |
| DS02 | -0.277 | 0.803 |
| DS04 | -0.319 | 1.334 |
| DS0c | -0.85 | -0.016 |
| GP01 | 1.024 | 2.856 |
| GP02 | 1.429 | 3.646 |
| GP0c | 1.462 | 2.237 |
| NOD | 1.469 | -0.57 |
| NZO | 1.662 | 1.357 |
| PWK | 2.461 | 3.684 |
| H37Rv_KO_CtpC | 0.461 | 1.444 |
| H37Rv_KO_CtpD | 1.174 | -0.219 |
| H37Rv_KO_Rv1272 | -0.039 | 3.107 |
| H37Rv_KO_SugABC | 1.223 | 1.881 |
| H37Rv_KO_MbtN | 0.553 | 4.596 |
| Trans05 | 1.844 | 3.83 |
| macrophage_unactivated | -0.817 | -3.608 |
| IL1 | 0.403 | -0.217 |
| Rapamycin | 0.037 | -0.697 |
| Tcell | 0.424 | 0.375 |
| GMCSF | -0.209 | -3.601 |
| IFNab | 0.508 | 0.511 |
| IFNg | -0.144 | -0.569 |
| IFNg_GMCSF1 | 0.478 | -0.946 |
| Rv1432_day32 | 3.186 | 0.554 |
| Rv1565c_day32 | -0.559 | -3.911 |
| secA2_input | -1.047 | 0.009 |
| delta_Rv3594 | 0.895 | 0.422 |
| delta_Rv3717 | 2.246 | 2.923 |
| delta_Rv3811 | 0.604 | 1.325 |
| delta_Rv0954 | -1.319 | -1.804 |
| PonA1 | -0.681 | -2.193 |
| EccD1_KO | -0.483 | -2.273 |
| EspI_KO | -0.861 | -2.313 |
| PE35_KO | -1.097 | -2.654 |
| PPE68_KO | -1.142 | -2.4 |
| glycerol2 | 0.441 | 0.198 |
| lignocerate | 1.701 | -0.038 |
| oleate | -1.182 | -1.096 |
| phosphatidylcholine | 0.803 | 0.342 |
| acetate | 2.04 | -0.261 |
| glucAc | 2.173 | 0.266 |
| Rv0950ko | 0.103 | -1.248 |
| Rv1096ko | 0.268 | -1.553 |
| Rv3684ko | 1.415 | 0.527 |
| delta_otsA_trehalose | 2.452 | -0.149 |