Top 10 genes with highest correlation to Rv1924c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3842c/glpQ1 | (cc=0.6629) | info on Rv3842c/glpQ1 |
| Rv1387/PPE20 | (cc=0.6073) | info on Rv1387/PPE20 |
| Rv1683/- | (cc=0.5816) | info on Rv1683/- |
| Rv0645c/mmaA1 | (cc=0.5762) | info on Rv0645c/mmaA1 |
| Rv3263/- | (cc=0.5576) | info on Rv3263/- |
| Rv1925/fadD31 | (cc=0.5344) | info on Rv1925/fadD31 |
| Rv1779c/- | (cc=0.5332) | info on Rv1779c/- |
| Rv0930/pstA1 | (cc=0.5168) | info on Rv0930/pstA1 |
| Rv0181c/- | (cc=0.5135) | info on Rv0181c/- |
| Rv0818/- | (cc=0.5048) | info on Rv0818/- |
Correlation of Rv1924c/- with Rv0818/-
Normalized LFCs for Rv1924c/-:
(description and provenance of datasets)
| Rv1924c/- | Rv0818/- | |
| Fe_supp_jason_reseq | -1.916 | -0.466 |
| low_pH_jason_reseq | 0.249 | 1.663 |
| NO_jason_reseq | 1.373 | 0.299 |
| B6_jason_reseq | 1.172 | 2.784 |
| MHCII_jason_reseq | 0.727 | 0.757 |
| Isoniazid02 | -0.06 | 2.415 |
| Rifampicin4 | 0.287 | -0.95 |
| Ethambutol3 | 0.083 | -0.032 |
| Meropenem3 | 0.904 | -3.061 |
| Vancomycin16 | 0.257 | -0.119 |
| Rv2680_day32 | -0.359 | 2.059 |
| H37Rv_KO_MarP | 0.102 | -1.637 |
| hypoxia_3wks | -1.244 | 0.367 |
| hypoxia_6wks | -0.693 | 2.08 |
| glycerol | -0.345 | 1.625 |
| cholesterol | -0.674 | 1.407 |
| AJ | 1.254 | 3.225 |
| Bibs02 | 1.081 | 0.135 |
| Bibs02c | -0.371 | 0.406 |
| BL6 | 0.979 | 2.235 |
| BL6a | 0.868 | 2.921 |
| BXD01 | 1.062 | 3.92 |
| BXD010 | 1.025 | 3.084 |
| BXD011 | 2.165 | 4.512 |
| BXD03 | 0.856 | 2.542 |
| BXD04 | 1.44 | 3.35 |
| BXD05 | 1.857 | 2.832 |
| BXD06 | 2.334 | 4.243 |
| BXD07 | 1.717 | 3.141 |
| BXD08 | 0.799 | 3.665 |
| BXD09 | 1.228 | 2.815 |
| CAST | 0.455 | 5.169 |
| CCcont | -0.597 | 1.299 |
| DS01 | -0.079 | 0.072 |
| DS02 | -0.277 | 0.682 |
| DS04 | -0.319 | 1.861 |
| DS0c | -0.85 | -0.281 |
| GP01 | 1.024 | 2.658 |
| GP02 | 1.429 | 1.581 |
| GP0c | 1.462 | 4.679 |
| NOD | 1.469 | 2.983 |
| NZO | 1.662 | 2.753 |
| PWK | 2.461 | 5.465 |
| H37Rv_KO_CtpC | 0.461 | 0.242 |
| H37Rv_KO_CtpD | 1.174 | 1.609 |
| H37Rv_KO_Rv1272 | -0.039 | 2.139 |
| H37Rv_KO_SugABC | 1.223 | 3.01 |
| H37Rv_KO_MbtN | 0.553 | 3.581 |
| Trans05 | 1.844 | 2.839 |
| macrophage_unactivated | -0.817 | -1.869 |
| IL1 | 0.403 | -2.711 |
| Rapamycin | 0.037 | -2.888 |
| Tcell | 0.424 | 0.267 |
| GMCSF | -0.209 | -2.627 |
| IFNab | 0.508 | 0.925 |
| IFNg | -0.144 | -4.311 |
| IFNg_GMCSF1 | 0.478 | -2.815 |
| Rv1432_day32 | 3.186 | 4.215 |
| Rv1565c_day32 | -0.559 | 1.248 |
| secA2_input | -1.047 | -0.106 |
| delta_Rv3594 | 0.895 | 0.312 |
| delta_Rv3717 | 2.246 | 2.38 |
| delta_Rv3811 | 0.604 | 1.152 |
| delta_Rv0954 | -1.319 | -0.456 |
| PonA1 | -0.681 | -0.777 |
| EccD1_KO | -0.483 | -2.582 |
| EspI_KO | -0.861 | -1.874 |
| PE35_KO | -1.097 | -0.143 |
| PPE68_KO | -1.142 | -1.037 |
| glycerol2 | 0.441 | -1.372 |
| lignocerate | 1.701 | -0.48 |
| oleate | -1.182 | -2.42 |
| phosphatidylcholine | 0.803 | -0.944 |
| acetate | 2.04 | -0.266 |
| glucAc | 2.173 | -0.073 |
| Rv0950ko | 0.103 | -1.894 |
| Rv1096ko | 0.268 | 0.012 |
| Rv3684ko | 1.415 | 0.57 |
| delta_otsA_trehalose | 2.452 | -0.379 |