Top 10 genes with highest correlation to Rv1922/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1864c/- | (cc=0.5435) | info on Rv1864c/- |
| Rv3401/- | (cc=0.5281) | info on Rv3401/- |
| Rv1250/- | (cc=0.4582) | info on Rv1250/- |
| Rv3309c/upp | (cc=0.4561) | info on Rv3309c/upp |
| Rv0894/- | (cc=0.4548) | info on Rv0894/- |
| Rv2466c/- | (cc=0.4504) | info on Rv2466c/- |
| Rv1563c/treY | (cc=0.4463) | info on Rv1563c/treY |
| Rv1554/frdC | (cc=0.4457) | info on Rv1554/frdC |
| Rv0846c/- | (cc=0.4443) | info on Rv0846c/- |
| Rv1453/- | (cc=0.4436) | info on Rv1453/- |
Correlation of Rv1922/- with Rv3401/-
Normalized LFCs for Rv1922/-:
(description and provenance of datasets)
| Rv1922/- | Rv3401/- | |
| Fe_supp_jason_reseq | 0.025 | 0.0 |
| low_pH_jason_reseq | 0.204 | -0.659 |
| NO_jason_reseq | -0.609 | -0.026 |
| B6_jason_reseq | 0.558 | 0.695 |
| MHCII_jason_reseq | 0.843 | 0.952 |
| Isoniazid02 | -0.105 | 0.383 |
| Rifampicin4 | -0.829 | 0.244 |
| Ethambutol3 | -0.207 | 0.72 |
| Meropenem3 | 0.688 | 1.518 |
| Vancomycin16 | -0.769 | -0.082 |
| Rv2680_day32 | 0.395 | 1.336 |
| H37Rv_KO_MarP | -0.025 | 0.23 |
| hypoxia_3wks | 0.136 | -0.068 |
| hypoxia_6wks | -0.035 | -0.035 |
| glycerol | 0.301 | -0.053 |
| cholesterol | 0.743 | 1.523 |
| AJ | 0.264 | -0.131 |
| Bibs02 | 0.103 | 0.567 |
| Bibs02c | -0.408 | -0.156 |
| BL6 | 0.117 | -0.906 |
| BL6a | -0.507 | -0.97 |
| BXD01 | -0.715 | -0.89 |
| BXD010 | -0.064 | -0.854 |
| BXD011 | 0.394 | -0.556 |
| BXD03 | -0.915 | -0.564 |
| BXD04 | -0.366 | -0.606 |
| BXD05 | -0.248 | -0.793 |
| BXD06 | -0.477 | -1.097 |
| BXD07 | -0.584 | -0.687 |
| BXD08 | -0.491 | -0.624 |
| BXD09 | -0.574 | -0.892 |
| CAST | 0.404 | 0.269 |
| CCcont | -0.865 | -1.095 |
| DS01 | 0.527 | 0.548 |
| DS02 | 0.35 | 0.421 |
| DS04 | 0.059 | 0.602 |
| DS0c | 1.095 | 0.404 |
| GP01 | 0.451 | 0.349 |
| GP02 | -0.271 | 0.307 |
| GP0c | -0.575 | -0.109 |
| NOD | 0.361 | 0.906 |
| NZO | 0.321 | -0.205 |
| PWK | -0.126 | -0.354 |
| H37Rv_KO_CtpC | -0.52 | -0.54 |
| H37Rv_KO_CtpD | 0.093 | 0.537 |
| H37Rv_KO_Rv1272 | -0.026 | -0.305 |
| H37Rv_KO_SugABC | -0.444 | -0.478 |
| H37Rv_KO_MbtN | 0.668 | -0.036 |
| Trans05 | 0.404 | 0.384 |
| macrophage_unactivated | 0.0 | -0.925 |
| IL1 | -0.234 | -0.97 |
| Rapamycin | -0.896 | -0.829 |
| Tcell | -0.228 | -0.671 |
| GMCSF | 0.198 | -0.57 |
| IFNab | -0.348 | -1.022 |
| IFNg | -0.409 | -0.123 |
| IFNg_GMCSF1 | 0.079 | 0.251 |
| Rv1432_day32 | 0.413 | 0.757 |
| Rv1565c_day32 | 0.329 | 0.763 |
| secA2_input | -1.229 | 0.261 |
| delta_Rv3594 | 0.012 | -0.223 |
| delta_Rv3717 | -0.395 | -0.227 |
| delta_Rv3811 | -0.086 | -0.235 |
| delta_Rv0954 | 0.189 | 0.088 |
| PonA1 | -0.261 | 0.323 |
| EccD1_KO | 0.497 | -0.033 |
| EspI_KO | -0.277 | -0.086 |
| PE35_KO | 0.75 | -0.146 |
| PPE68_KO | 1.113 | -0.16 |
| glycerol2 | -0.388 | 0.083 |
| lignocerate | -0.337 | -0.571 |
| oleate | -0.058 | -0.647 |
| phosphatidylcholine | -0.289 | -0.13 |
| acetate | -0.209 | -0.191 |
| glucAc | -0.642 | -0.389 |
| Rv0950ko | -0.142 | 0.093 |
| Rv1096ko | -0.112 | 0.184 |
| Rv3684ko | -0.278 | -0.105 |
| delta_otsA_trehalose | 0.522 | 0.465 |