Top 10 genes with highest correlation to Rv1922/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1864c/- | (cc=0.5435) | info on Rv1864c/- |
| Rv3401/- | (cc=0.5281) | info on Rv3401/- |
| Rv1250/- | (cc=0.4582) | info on Rv1250/- |
| Rv3309c/upp | (cc=0.4561) | info on Rv3309c/upp |
| Rv0894/- | (cc=0.4548) | info on Rv0894/- |
| Rv2466c/- | (cc=0.4504) | info on Rv2466c/- |
| Rv1563c/treY | (cc=0.4463) | info on Rv1563c/treY |
| Rv1554/frdC | (cc=0.4457) | info on Rv1554/frdC |
| Rv0846c/- | (cc=0.4443) | info on Rv0846c/- |
| Rv1453/- | (cc=0.4436) | info on Rv1453/- |
Correlation of Rv1922/- with Rv1453/-
Normalized LFCs for Rv1922/-:
(description and provenance of datasets)
| Rv1922/- | Rv1453/- | |
| Fe_supp_jason_reseq | 0.025 | 0.72 |
| low_pH_jason_reseq | 0.204 | 0.659 |
| NO_jason_reseq | -0.609 | -0.672 |
| B6_jason_reseq | 0.558 | 2.065 |
| MHCII_jason_reseq | 0.843 | 1.373 |
| Isoniazid02 | -0.105 | 1.302 |
| Rifampicin4 | -0.829 | 0.219 |
| Ethambutol3 | -0.207 | 0.876 |
| Meropenem3 | 0.688 | 0.7 |
| Vancomycin16 | -0.769 | 0.114 |
| Rv2680_day32 | 0.395 | 0.241 |
| H37Rv_KO_MarP | -0.025 | 0.793 |
| hypoxia_3wks | 0.136 | 0.905 |
| hypoxia_6wks | -0.035 | 1.054 |
| glycerol | 0.301 | -0.025 |
| cholesterol | 0.743 | -0.156 |
| AJ | 0.264 | 0.35 |
| Bibs02 | 0.103 | 0.738 |
| Bibs02c | -0.408 | 0.526 |
| BL6 | 0.117 | -1.143 |
| BL6a | -0.507 | -0.062 |
| BXD01 | -0.715 | -0.497 |
| BXD010 | -0.064 | -0.054 |
| BXD011 | 0.394 | -0.022 |
| BXD03 | -0.915 | -0.914 |
| BXD04 | -0.366 | -0.5 |
| BXD05 | -0.248 | -0.657 |
| BXD06 | -0.477 | -0.426 |
| BXD07 | -0.584 | -0.491 |
| BXD08 | -0.491 | -0.219 |
| BXD09 | -0.574 | -0.257 |
| CAST | 0.404 | -0.048 |
| CCcont | -0.865 | -1.652 |
| DS01 | 0.527 | 0.818 |
| DS02 | 0.35 | 0.756 |
| DS04 | 0.059 | 1.053 |
| DS0c | 1.095 | 1.053 |
| GP01 | 0.451 | -0.652 |
| GP02 | -0.271 | -1.909 |
| GP0c | -0.575 | -1.531 |
| NOD | 0.361 | 0.251 |
| NZO | 0.321 | 0.152 |
| PWK | -0.126 | 0.436 |
| H37Rv_KO_CtpC | -0.52 | -1.253 |
| H37Rv_KO_CtpD | 0.093 | 0.017 |
| H37Rv_KO_Rv1272 | -0.026 | -0.603 |
| H37Rv_KO_SugABC | -0.444 | -0.68 |
| H37Rv_KO_MbtN | 0.668 | -0.386 |
| Trans05 | 0.404 | -0.9 |
| macrophage_unactivated | 0.0 | -0.78 |
| IL1 | -0.234 | -0.528 |
| Rapamycin | -0.896 | -0.344 |
| Tcell | -0.228 | -0.261 |
| GMCSF | 0.198 | -0.232 |
| IFNab | -0.348 | -0.538 |
| IFNg | -0.409 | -0.794 |
| IFNg_GMCSF1 | 0.079 | -0.119 |
| Rv1432_day32 | 0.413 | 0.072 |
| Rv1565c_day32 | 0.329 | 0.264 |
| secA2_input | -1.229 | 0.41 |
| delta_Rv3594 | 0.012 | -0.118 |
| delta_Rv3717 | -0.395 | -1.099 |
| delta_Rv3811 | -0.086 | 0.079 |
| delta_Rv0954 | 0.189 | -0.846 |
| PonA1 | -0.261 | -0.374 |
| EccD1_KO | 0.497 | 0.503 |
| EspI_KO | -0.277 | -0.151 |
| PE35_KO | 0.75 | 0.277 |
| PPE68_KO | 1.113 | 0.336 |
| glycerol2 | -0.388 | 0.338 |
| lignocerate | -0.337 | 0.073 |
| oleate | -0.058 | 0.525 |
| phosphatidylcholine | -0.289 | 0.43 |
| acetate | -0.209 | -0.136 |
| glucAc | -0.642 | -0.174 |
| Rv0950ko | -0.142 | -0.32 |
| Rv1096ko | -0.112 | -0.787 |
| Rv3684ko | -0.278 | -0.331 |
| delta_otsA_trehalose | 0.522 | 1.851 |