Top 10 genes with highest correlation to Rv1922/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1864c/- | (cc=0.5435) | info on Rv1864c/- |
| Rv3401/- | (cc=0.5281) | info on Rv3401/- |
| Rv1250/- | (cc=0.4582) | info on Rv1250/- |
| Rv3309c/upp | (cc=0.4561) | info on Rv3309c/upp |
| Rv0894/- | (cc=0.4548) | info on Rv0894/- |
| Rv2466c/- | (cc=0.4504) | info on Rv2466c/- |
| Rv1563c/treY | (cc=0.4463) | info on Rv1563c/treY |
| Rv1554/frdC | (cc=0.4457) | info on Rv1554/frdC |
| Rv0846c/- | (cc=0.4443) | info on Rv0846c/- |
| Rv1453/- | (cc=0.4436) | info on Rv1453/- |
Correlation of Rv1922/- with Rv1563c/treY
Normalized LFCs for Rv1922/-:
(description and provenance of datasets)
| Rv1922/- | Rv1563c/treY | |
| Fe_supp_jason_reseq | 0.025 | 0.341 |
| low_pH_jason_reseq | 0.204 | 0.845 |
| NO_jason_reseq | -0.609 | -0.969 |
| B6_jason_reseq | 0.558 | 0.666 |
| MHCII_jason_reseq | 0.843 | 1.022 |
| Isoniazid02 | -0.105 | 0.167 |
| Rifampicin4 | -0.829 | 0.311 |
| Ethambutol3 | -0.207 | -0.153 |
| Meropenem3 | 0.688 | -0.497 |
| Vancomycin16 | -0.769 | 0.305 |
| Rv2680_day32 | 0.395 | -0.344 |
| H37Rv_KO_MarP | -0.025 | -0.662 |
| hypoxia_3wks | 0.136 | -0.195 |
| hypoxia_6wks | -0.035 | -0.672 |
| glycerol | 0.301 | 0.429 |
| cholesterol | 0.743 | 0.536 |
| AJ | 0.264 | -0.188 |
| Bibs02 | 0.103 | 0.837 |
| Bibs02c | -0.408 | 0.735 |
| BL6 | 0.117 | -0.138 |
| BL6a | -0.507 | 0.149 |
| BXD01 | -0.715 | -0.813 |
| BXD010 | -0.064 | -1.406 |
| BXD011 | 0.394 | -0.626 |
| BXD03 | -0.915 | -0.608 |
| BXD04 | -0.366 | -1.032 |
| BXD05 | -0.248 | -0.975 |
| BXD06 | -0.477 | -0.269 |
| BXD07 | -0.584 | -0.933 |
| BXD08 | -0.491 | -0.447 |
| BXD09 | -0.574 | -0.375 |
| CAST | 0.404 | -0.254 |
| CCcont | -0.865 | 0.497 |
| DS01 | 0.527 | 1.648 |
| DS02 | 0.35 | 1.604 |
| DS04 | 0.059 | 0.888 |
| DS0c | 1.095 | 1.332 |
| GP01 | 0.451 | -0.617 |
| GP02 | -0.271 | -0.561 |
| GP0c | -0.575 | 0.741 |
| NOD | 0.361 | 0.661 |
| NZO | 0.321 | 0.465 |
| PWK | -0.126 | -0.523 |
| H37Rv_KO_CtpC | -0.52 | -0.433 |
| H37Rv_KO_CtpD | 0.093 | 0.601 |
| H37Rv_KO_Rv1272 | -0.026 | 0.072 |
| H37Rv_KO_SugABC | -0.444 | 0.403 |
| H37Rv_KO_MbtN | 0.668 | -0.596 |
| Trans05 | 0.404 | 1.077 |
| macrophage_unactivated | 0.0 | 0.347 |
| IL1 | -0.234 | 0.427 |
| Rapamycin | -0.896 | -1.046 |
| Tcell | -0.228 | -0.665 |
| GMCSF | 0.198 | 0.0 |
| IFNab | -0.348 | -0.484 |
| IFNg | -0.409 | 0.0 |
| IFNg_GMCSF1 | 0.079 | 0.233 |
| Rv1432_day32 | 0.413 | 0.13 |
| Rv1565c_day32 | 0.329 | 0.545 |
| secA2_input | -1.229 | -1.227 |
| delta_Rv3594 | 0.012 | 0.34 |
| delta_Rv3717 | -0.395 | 0.279 |
| delta_Rv3811 | -0.086 | 0.33 |
| delta_Rv0954 | 0.189 | -0.34 |
| PonA1 | -0.261 | 0.0 |
| EccD1_KO | 0.497 | 1.214 |
| EspI_KO | -0.277 | 0.918 |
| PE35_KO | 0.75 | 1.82 |
| PPE68_KO | 1.113 | 1.469 |
| glycerol2 | -0.388 | 0.643 |
| lignocerate | -0.337 | 0.613 |
| oleate | -0.058 | -0.478 |
| phosphatidylcholine | -0.289 | 0.311 |
| acetate | -0.209 | 0.836 |
| glucAc | -0.642 | 0.685 |
| Rv0950ko | -0.142 | -0.63 |
| Rv1096ko | -0.112 | -0.368 |
| Rv3684ko | -0.278 | -0.4 |
| delta_otsA_trehalose | 0.522 | 4.098 |