Top 10 genes with highest correlation to Rv1920/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1871c/- | (cc=0.5532) | info on Rv1871c/- |
| Rv1800/PPE28 | (cc=0.4866) | info on Rv1800/PPE28 |
| Rv1850/ureC | (cc=0.4828) | info on Rv1850/ureC |
| Rv0845/- | (cc=0.4632) | info on Rv0845/- |
| Rv2778c/- | (cc=0.4519) | info on Rv2778c/- |
| Rv2435c/- | (cc=0.448) | info on Rv2435c/- |
| Rv0867c/rpfA | (cc=0.4344) | info on Rv0867c/rpfA |
| Rv2274c/mazF8 | (cc=0.424) | info on Rv2274c/mazF8 |
| Rv2584c/apt | (cc=0.4226) | info on Rv2584c/apt |
| Rv2038c/- | (cc=0.4208) | info on Rv2038c/- |
Correlation of Rv1920/- with Rv2274c/mazF8
Normalized LFCs for Rv1920/-:
(description and provenance of datasets)
| Rv1920/- | Rv2274c/mazF8 | |
| Fe_supp_jason_reseq | -1.601 | -1.392 |
| low_pH_jason_reseq | -0.201 | -1.832 |
| NO_jason_reseq | -0.383 | -0.165 |
| B6_jason_reseq | -0.487 | -1.492 |
| MHCII_jason_reseq | -1.332 | -2.047 |
| Isoniazid02 | -0.061 | -0.026 |
| Rifampicin4 | 0.217 | -0.309 |
| Ethambutol3 | -0.094 | -0.454 |
| Meropenem3 | 0.294 | -0.447 |
| Vancomycin16 | -0.093 | -0.048 |
| Rv2680_day32 | -0.545 | 1.226 |
| H37Rv_KO_MarP | -0.207 | 0.825 |
| hypoxia_3wks | 0.658 | 0.291 |
| hypoxia_6wks | 0.791 | 1.211 |
| glycerol | -0.581 | -0.483 |
| cholesterol | -0.301 | -0.107 |
| AJ | 0.687 | 1.16 |
| Bibs02 | 0.062 | -0.934 |
| Bibs02c | -0.174 | -0.379 |
| BL6 | -0.135 | 1.256 |
| BL6a | 0.276 | 0.839 |
| BXD01 | -0.271 | 1.272 |
| BXD010 | 0.139 | -0.161 |
| BXD011 | 0.064 | 0.967 |
| BXD03 | -0.096 | 1.797 |
| BXD04 | -0.014 | 2.593 |
| BXD05 | 0.06 | 1.491 |
| BXD06 | 0.102 | 0.967 |
| BXD07 | 0.331 | 0.865 |
| BXD08 | 0.123 | 2.262 |
| BXD09 | 0.216 | 1.051 |
| CAST | 0.202 | 1.218 |
| CCcont | -0.487 | 1.134 |
| DS01 | 0.169 | -0.428 |
| DS02 | -0.194 | -1.475 |
| DS04 | -0.298 | 0.218 |
| DS0c | -0.063 | 0.05 |
| GP01 | 1.29 | -1.43 |
| GP02 | -0.999 | -1.289 |
| GP0c | -0.62 | -1.463 |
| NOD | -0.628 | 0.607 |
| NZO | 0.988 | 1.348 |
| PWK | -0.594 | 0.045 |
| H37Rv_KO_CtpC | 0.241 | 1.118 |
| H37Rv_KO_CtpD | 0.851 | -0.507 |
| H37Rv_KO_Rv1272 | 1.096 | 0.862 |
| H37Rv_KO_SugABC | -0.058 | -0.926 |
| H37Rv_KO_MbtN | 0.832 | 0.782 |
| Trans05 | 0.825 | 1.324 |
| macrophage_unactivated | 1.146 | 1.667 |
| IL1 | -0.021 | 1.735 |
| Rapamycin | 0.043 | -0.353 |
| Tcell | -0.3 | 2.141 |
| GMCSF | 1.001 | 0.071 |
| IFNab | 0.396 | 0.55 |
| IFNg | 0.925 | 0.072 |
| IFNg_GMCSF1 | 0.393 | 0.336 |
| Rv1432_day32 | 0.267 | 0.0 |
| Rv1565c_day32 | 0.438 | 1.308 |
| secA2_input | -1.273 | -1.545 |
| delta_Rv3594 | -0.035 | 0.977 |
| delta_Rv3717 | 0.216 | 1.223 |
| delta_Rv3811 | 0.0 | -0.564 |
| delta_Rv0954 | -0.801 | 0.473 |
| PonA1 | -0.298 | -0.278 |
| EccD1_KO | -0.418 | 0.802 |
| EspI_KO | -0.168 | 0.0 |
| PE35_KO | -0.128 | 0.545 |
| PPE68_KO | 0.643 | 0.899 |
| glycerol2 | 0.377 | -0.242 |
| lignocerate | 0.188 | -0.279 |
| oleate | 0.302 | 0.5 |
| phosphatidylcholine | 0.751 | 0.164 |
| acetate | -0.048 | -0.243 |
| glucAc | -0.178 | -0.237 |
| Rv0950ko | -1.279 | -1.821 |
| Rv1096ko | -1.224 | -2.376 |
| Rv3684ko | -1.035 | -1.978 |
| delta_otsA_trehalose | 1.142 | -0.854 |